Just found out that I was storing the graphDb in another class and I did 
not update the reference to it. Sorry for spamming.

Kind regards,
Cherie

On Saturday, 4 June 2016 18:32:28 UTC+1, Cherie Pun wrote:
>
> Hi,
>
> I wrote this snippet of code to restart the database, but it's throwing 
> errors.
>
>> private void restartDatabase(){
>>         if(graphDb != null && graphDb.isAvailable(0)){
>>             graphDb.shutdown();
>>         }
>>         graphDb = new GraphDatabaseFactory()
>>                 .newEmbeddedDatabaseBuilder( new File(PATH_TO_DATABASE ))
>>                 .setConfig(GraphDatabaseSettings.allow_store_upgrade, 
>> "true")
>>                 .newGraphDatabase();
>>         registerShutdownHook( graphDb );
>> }
>
>
> private void registerShutdownHook( final GraphDatabaseService graphDb )
>>     {
>>         // Registers a shutdown hook for the Neo4j instance so that it
>>         // shuts down nicely when the VM exits (even if you "Ctrl-C" the
>>         // running application).
>>         Runtime.getRuntime().addShutdownHook( new Thread()
>>         {
>>             @Override
>>             public void run()
>>             {
>>                 graphDb.shutdown();
>>             }
>>         } );
>>     } 
>
>
> Stacktrace:
>
>> Exception in thread "main" 
>> org.neo4j.kernel.impl.core.ThreadToStatementContextBridge$BridgeDatabaseShutdownException:
>>  
>> This database is shutdown.
>> at 
>> org.neo4j.kernel.impl.core.ThreadToStatementContextBridge.checkIfShutdown(ThreadToStatementContextBridge.java:96)
>> at 
>> org.neo4j.kernel.impl.core.ThreadToStatementContextBridge.hasTransaction(ThreadToStatementContextBridge.java:43)
>> at 
>> org.neo4j.kernel.impl.factory.ClassicCoreSPI.isInOpenTransaction(ClassicCoreSPI.java:199)
>> at 
>> org.neo4j.kernel.impl.factory.GraphDatabaseFacade.beginTransaction(GraphDatabaseFacade.java:335)
>> at 
>> org.neo4j.kernel.impl.factory.GraphDatabaseFacade.beginTx(GraphDatabaseFacade.java:330)
>>        ....
>
>
> Any idea why the database is still shutdown instead of restarted? Thanks. 
>
> Kind regards,
> Cherie
>
> On 4 June 2016 at 15:34, 'Michael Hunger' via Neo4j <
> [email protected]> wrote:
>
>> Shutdown and create new, yes
>>
>> Von meinem iPhone gesendet
>>
>> Am 04.06.2016 um 14:17 schrieb Cherie Pun <[email protected]>:
>>
>> If I am using java GraphDatabaseService, do I need to create a new 
>> embedded database to restart it? Thanks.
>>
>> Kind regards,
>> Cherie
>>
>> On 4 June 2016 at 03:01, 'Michael Hunger' via Neo4j <
>> [email protected]> wrote:
>>
>>> Just restart the db after deleting a lot of relationships will enable 
>>> record-reuse.
>>>
>>> > Am 04.06.2016 um 01:49 schrieb Cherie Pun <[email protected]>:
>>> >
>>> > Hi,
>>> >
>>> > I have seen a few questions that were posted from before that it does 
>>> not free the space up immediately. My application is running analysis over 
>>> the database repeatedly but each time inserting different number of 
>>> relationships so I have to remove them before I run the next iteration. The 
>>> database size seems to be growing continuously even when the relationships 
>>> are removed. I am wondering if the size of the database will slow my 
>>> application down because there are so many unused ids.
>>> >
>>> > Thanks!
>>> >
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