I haven't built this exact clock but when I used these tubes I used a piece 
of clear plastic which I drew both horizontal and vertical lines on that 
corresponded to the four rivets inside the tube as well as the segments and 
then used a piece of double sided tape on the front of each tube to fasten 
them to this piece of plastic so they stayed aligned when soldering, I also 
used paper shims between the tubes and rubber bands to keep the tubes 
grouped together. I also used standoffs on the PCB so that I could put the 
tubes face down on the table with the PCB above them at the right height.

The original Russian designs I have seen usually used silicone glue around 
the tubes to completely encase them so they stayed in place and then the 
pins were bent and soldered to solder posts at the back of the PCB, the 
pins usually had a plastic sleeve to make sure that there were no short 
circuits.

/Martin

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