Dear Geoff and Yaroslav, Thank you for your help. The Mac version does not produce any errors with these arguments. I hope the Debian version can be fixed since Debian is my preferred platform.
Antti On 2 Jul 2013, at 18:17, Geoffrey K Aguirre wrote: > Antti -- I can't speak to the troubles with the debruijn code in debian, but > we do have a compiled version of the software available for Mac OS X > > https://cfn.upenn.edu/aguirre/wiki/public:de_bruijn_software > > Geoff > > > On Jul 2, 2013, at 9:06 AM, Antti Korvenoja <[email protected]> > wrote: > >> Dear developers, >> >> I'm trying to run debruijn on jessie. Using a guide function leads to >> output below. >> >> debruijn 5 2 5 HRF neural.txt -eval 5000 >> >> Using a Hemodynamic Response Filter as a guide function. >> The SOA used here is: 5000 >> >> >> >> Cycle found: >> ------------ >> 0,2,4,1,1,4,3,2,0,4,4,0,1,2,1,0,3,4,2,2,3,3,1,3,0 >> ------------ >> Valid sequence >> >> debruijn: malloc.c:3616: _int_malloc: Assertion `(unsigned long)(size) >>> = (unsigned long)(nb)' failed. >> Aborted >> >> debruijn 5 2 runs without error as well as e.g. debruijn 5 3 5 HRF >> neural.txt -eval 5000. >> >> Thank you for your help, >> >> Antti >> >> >> >> _______________________________________________ >> Neurodebian-users mailing list >> [email protected] >> http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/neurodebian-users > > > -- > > Geoffrey Karl Aguirre, M.D., Ph.D. > https://cfn.upenn.edu/aguirre > Associate Professor of Neurology > Hospital of the University of Pennsylvania > Philadelphia, PA > _______________________________________________ Neurodebian-users mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/neurodebian-users
