Hey, On Mon, Jan 13, 2014 at 3:02 PM, Arman Eshaghi <[email protected]>wrote:
> Specifically my problem is with buildtemplateparallel in ANTs that > benefits from a couple of grid engines including SGE, Apple XGrid, PBS but > not condor. For some reason the above trick (qsub symbolic link to > condor_qsub) does not work here, and I receive “condor_qsub ‘-n’ option not > recognized’. From the error message it clearly appears something is passed > to condor_qsub that it can not handle, even when imitating SGE qsub. > > Here is what I have done: > > 1. Checking buildtemplateparallel.sh script to figure out the problem. So > far no success, it sounds non-trivial (to me). > 2. Asking from ANTs mailing list, they suggested I make the script to work > with condor on myself (see no. 1). > 3. Getting back to SGE: not an option, I bragged about condor a few weeks > ago to IT admin, I’ll lose credibility. > 4. Figure out what qsub -n does and try supporting it in condor_qsub However, I have trouble figuring out what -n is supposed to do. Any hint? Michael
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