Branch: refs/heads/master
Home: https://github.com/NixOS/nixpkgs
Commit: 14ee766024a7d1cf97e215c66d2193012ee346ca
https://github.com/NixOS/nixpkgs/commit/14ee766024a7d1cf97e215c66d2193012ee346ca
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/libraries/science/math/openblas/default.nix
Log Message:
-----------
openblas: set NUM_THREADS and USE_OPENMP
Commit: 86fb034008b007e4e9a4a595f6d789e105958772
https://github.com/NixOS/nixpkgs/commit/86fb034008b007e4e9a4a595f6d789e105958772
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/libraries/science/math/openblas/default.nix
Log Message:
-----------
openblas: build with native-width integers by default
Commit: a376a68f74eebeeee85e5f7a876d14f449623a17
https://github.com/NixOS/nixpkgs/commit/a376a68f74eebeeee85e5f7a876d14f449623a17
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/top-level/all-packages.nix
Log Message:
-----------
openblas: add openblasCompat
openblasCompat uses 32-bit integers on all platforms for compatibility
with standard BLAS and LAPACK.
Commit: a0a5fb46ff889be6b5c66521a896f3e206d76e36
https://github.com/NixOS/nixpkgs/commit/a0a5fb46ff889be6b5c66521a896f3e206d76e36
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/top-level/all-packages.nix
Log Message:
-----------
openblas: use default liblapack
Commit: b4eb8a5bc32c99b8ee7c3fcd2d414ce10d39b437
https://github.com/NixOS/nixpkgs/commit/b4eb8a5bc32c99b8ee7c3fcd2d414ce10d39b437
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
R pkgs/development/libraries/science/math/openblas/0.2.10.nix
R pkgs/development/libraries/science/math/openblas/0.2.2.nix
Log Message:
-----------
openblas: remove old expressions
Commit: 982aabc5617f144626a108fa6dc57bdcb9592e87
https://github.com/NixOS/nixpkgs/commit/982aabc5617f144626a108fa6dc57bdcb9592e87
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/libraries/science/math/suitesparse/4.2.nix
R pkgs/development/libraries/science/math/suitesparse/disable-metis.patch
Log Message:
-----------
suitesparse_4_2: build with openblas
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
Commit: b02f300c445296c9580d9ccd1d7000a09ac10b0d
https://github.com/NixOS/nixpkgs/commit/b02f300c445296c9580d9ccd1d7000a09ac10b0d
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
R
pkgs/development/libraries/science/math/suitesparse/0001-disable-metis.patch
M pkgs/development/libraries/science/math/suitesparse/default.nix
Log Message:
-----------
suitesparse_4_4_1: build with openblas
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
Commit: e5ee1a0577164d7e253ba69a2239f37b78a9c3c0
https://github.com/NixOS/nixpkgs/commit/e5ee1a0577164d7e253ba69a2239f37b78a9c3c0
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
R
pkgs/development/libraries/science/math/suitesparse/0002-set-install-dir.patch
R
pkgs/development/libraries/science/math/suitesparse/0003-blas-lapack-flags.patch
R pkgs/development/libraries/science/math/suitesparse/SuiteSparse_config.mk
M pkgs/development/libraries/science/math/suitesparse/default.nix
Log Message:
-----------
suitesparse: remove unnecessary patches
Commit: 4f98287afa7c20ae8d5316cad603f834a60a7b18
https://github.com/NixOS/nixpkgs/commit/4f98287afa7c20ae8d5316cad603f834a60a7b18
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.2.nix
M pkgs/top-level/all-packages.nix
Log Message:
-----------
julia02: build with openblas
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
Commit: 77a454b866633b6accd144a28c2616a2ea1fd8b0
https://github.com/NixOS/nixpkgs/commit/77a454b866633b6accd144a28c2616a2ea1fd8b0
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
M pkgs/top-level/all-packages.nix
Log Message:
-----------
julia03: refactor and build with openblas
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
Commit: bbda7d427b0858be50236d99011de29416652c2d
https://github.com/NixOS/nixpkgs/commit/bbda7d427b0858be50236d99011de29416652c2d
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/top-level/all-packages.nix
Log Message:
-----------
suitesparse: version derivations by major version only
Commit: a17d8bcc4bbf3e74cacecf956cd06cb9a98b52ba
https://github.com/NixOS/nixpkgs/commit/a17d8bcc4bbf3e74cacecf956cd06cb9a98b52ba
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/libraries/science/math/suitesparse/default.nix
Log Message:
-----------
suitesparse_4_4: update to 4.4.4
Commit: 86c54040aa1fba0307eeaebe00968a0a81871127
https://github.com/NixOS/nixpkgs/commit/86c54040aa1fba0307eeaebe00968a0a81871127
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/top-level/all-packages.nix
Log Message:
-----------
julia03: build with suitesparse_4_4
Commit: adcdec2e70905a35c99bd2ba0991dbdd13280f38
https://github.com/NixOS/nixpkgs/commit/adcdec2e70905a35c99bd2ba0991dbdd13280f38
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
Log Message:
-----------
julia03: use system patchelf
Commit: e36b3ec0a56c3b06152a205a46804733b88695d6
https://github.com/NixOS/nixpkgs/commit/e36b3ec0a56c3b06152a205a46804733b88695d6
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
M pkgs/development/libraries/science/math/suitesparse/default.nix
Log Message:
-----------
suitesparse: build shared libraries
Commit: fff0191f481c49320d5c540ed8ae491a44b59c8e
https://github.com/NixOS/nixpkgs/commit/fff0191f481c49320d5c540ed8ae491a44b59c8e
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/libraries/science/math/arpack/default.nix
Log Message:
-----------
arpack: build with openblas
Commit: 5c9750e5bbf52977d6fb95d9ff07e09f10769b01
https://github.com/NixOS/nixpkgs/commit/5c9750e5bbf52977d6fb95d9ff07e09f10769b01
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
Log Message:
-----------
julia03: link shared libraries privately
Commit: 41cc06fd000293d2ce9eb81ab8ca5a3654f5ad73
https://github.com/NixOS/nixpkgs/commit/41cc06fd000293d2ce9eb81ab8ca5a3654f5ad73
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
Log Message:
-----------
julia03: use system arpack
Commit: bd280660f75b0da002a6faa456e10ea63d6851bf
https://github.com/NixOS/nixpkgs/commit/bd280660f75b0da002a6faa456e10ea63d6851bf
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
Log Message:
-----------
julia03: clean up LDFLAGS and LD_LIBRARY_PATH
There were a few unused LDFLAGS and LD_LIBRARY_PATH settings. There was
also an incorrect setting; Julia prefers to be linked to threaded
FFTW. The libary names are now set correctly so that it's not necessary
to link system libraries into $out/lib/julia as if they were private
libraries. The LDFLAGS were also moved out of NIX_LDFLAGS so they will
affect only the Julia build itself, and not all the individual private
libraries.
Commit: 2b525f60c9981f67eb6ebe662a8d9b1c51f552d1
https://github.com/NixOS/nixpkgs/commit/2b525f60c9981f67eb6ebe662a8d9b1c51f552d1
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
A pkgs/development/compilers/julia/0001-work-around-buggy-wcwidth.patch
Log Message:
-----------
update julia-0.3.6 -> julia-0.3.9
Includes a workaround for the test suite suggested by
upstream
(https://github.com/JuliaLang/julia/commit/b192bf0e2f0a0c5b232c3352c6e996e5f11053f2#commitcomment-11139348)
for a buggy system wcwidth.
Commit: 63be59abc75eb79eaeaf455608539001624ce420
https://github.com/NixOS/nixpkgs/commit/63be59abc75eb79eaeaf455608539001624ce420
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/libraries/utf8proc/default.nix
Log Message:
-----------
utf8proc: use makeFlags instead of overriding installPhase
Commit: b255f8df2ed76e9696dbbcfefc126a6a84f7e6dc
https://github.com/NixOS/nixpkgs/commit/b255f8df2ed76e9696dbbcfefc126a6a84f7e6dc
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
Log Message:
-----------
julia03: use system utf8proc
Commit: 6f3dfc0cf886643b3a5e79b2eb7dc412ab9dc833
https://github.com/NixOS/nixpkgs/commit/6f3dfc0cf886643b3a5e79b2eb7dc412ab9dc833
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
Log Message:
-----------
julia03: remove unused dependencies
Commit: 1a11b52ffab4c1832f0367fa15142f8b3ebda9c4
https://github.com/NixOS/nixpkgs/commit/1a11b52ffab4c1832f0367fa15142f8b3ebda9c4
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
Log Message:
-----------
julia03: use system double_conversion (grisu)
Commit: 6e3eac5c92036554974b34443e8157b7af9b67df
https://github.com/NixOS/nixpkgs/commit/6e3eac5c92036554974b34443e8157b7af9b67df
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/compilers/julia/0.3.nix
Log Message:
-----------
julia03: avoid opaque shell scripts
The old expression used a shell script to set some repetitive
makeFlags. The makeFlags settings were spread out over different parts
of the expression. This deters new contributors. The new expression is
clearer, at the cost of being slightly repetitive.
Commit: 90b2afee040c8c20af58fdcec789e9bb73908b9a
https://github.com/NixOS/nixpkgs/commit/90b2afee040c8c20af58fdcec789e9bb73908b9a
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/haskell-modules/configuration-common.nix
Log Message:
-----------
haskell-hmatrix: build with openblas
Fixes #6392.
Commit: e729a88474da9e6cccd111a5f7c71f164ab8d784
https://github.com/NixOS/nixpkgs/commit/e729a88474da9e6cccd111a5f7c71f164ab8d784
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/applications/science/math/R/default.nix
M pkgs/top-level/all-packages.nix
Log Message:
-----------
R: build with openblas
Fixes #6393.
Commit: bfe106cfa6613c4ab5c6b7aa6a0650e11bc63267
https://github.com/NixOS/nixpkgs/commit/bfe106cfa6613c4ab5c6b7aa6a0650e11bc63267
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-04 (Thu, 04 Jun 2015)
Changed paths:
M pkgs/development/python-modules/numpy-scipy-support.nix
M pkgs/top-level/python-packages.nix
Log Message:
-----------
Build numpy and scipy with openblas
Fixes #6772.
Commit: fa290cb741cb23a04024f09e2018d5ea7bc0e3a3
https://github.com/NixOS/nixpkgs/commit/fa290cb741cb23a04024f09e2018d5ea7bc0e3a3
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-07 (Sun, 07 Jun 2015)
Changed paths:
M pkgs/development/libraries/qrupdate/default.nix
Log Message:
-----------
qrupdate: build with openblas
Replaces ATLAS and LAPACK with OpenBLAS. Also builds both static and
shared libraries. (Octave upstream recommends the shared library.)
Commit: 614c867b29299668dced9ab705bacebcd433bef3
https://github.com/NixOS/nixpkgs/commit/614c867b29299668dced9ab705bacebcd433bef3
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-07 (Sun, 07 Jun 2015)
Changed paths:
M pkgs/development/interpreters/octave/default.nix
M pkgs/top-level/all-packages.nix
Log Message:
-----------
octave: build with openblas
The expression inherits integer width from OpenBLAS, so Octave will use
64-bit integers if OpenBLAS supports it. However, this feature in Octave
is experimental, so we continue to use OpenBLAS with 32-bit integers by
default. (This only applies to the integer width, the pointer width is
always the platform-native width.)
Commit: 71b848b45dc58d7e75eb7f07b214fb8c62e5f58d
https://github.com/NixOS/nixpkgs/commit/71b848b45dc58d7e75eb7f07b214fb8c62e5f58d
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-09 (Tue, 09 Jun 2015)
Changed paths:
M pkgs/development/libraries/science/math/openblas/default.nix
Log Message:
-----------
openblas: build with USE_OPENMP=0 on Darwin
Darwin's clang does not support OpenMP yet. OpenMP is required on other
platforms for e.g. Julia.
Commit: b120a737fd3f2871af7d57c88c010884041ce6d4
https://github.com/NixOS/nixpkgs/commit/b120a737fd3f2871af7d57c88c010884041ce6d4
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-09 (Tue, 09 Jun 2015)
Changed paths:
M pkgs/development/r-modules/default.nix
M pkgs/development/r-modules/patches/BayesLogit_cblas.patch
Log Message:
-----------
rPackages.BayesLogit: build with openblas
Commit: 77aa1c990ec673446c38b4c733f8ad7db9e66af1
https://github.com/NixOS/nixpkgs/commit/77aa1c990ec673446c38b4c733f8ad7db9e66af1
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-09 (Tue, 09 Jun 2015)
Changed paths:
M pkgs/development/r-modules/default.nix
Log Message:
-----------
rPackages.Mposterior: build with openblas
Commit: 58754130cc3f34169de05f7ef14a9102221f5f13
https://github.com/NixOS/nixpkgs/commit/58754130cc3f34169de05f7ef14a9102221f5f13
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-09 (Tue, 09 Jun 2015)
Changed paths:
M pkgs/development/r-modules/default.nix
Log Message:
-----------
rPackages.slfm: build with openblas
Commit: 8245caedf158ca91997412f8797f1802e2c8a925
https://github.com/NixOS/nixpkgs/commit/8245caedf158ca91997412f8797f1802e2c8a925
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-09 (Tue, 09 Jun 2015)
Changed paths:
M pkgs/development/r-modules/default.nix
Log Message:
-----------
rPackages.SamplerCompare: build with openblas
Commit: 406428d6a4641f0a1a05e58a3b09f7d183059cfd
https://github.com/NixOS/nixpkgs/commit/406428d6a4641f0a1a05e58a3b09f7d183059cfd
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-09 (Tue, 09 Jun 2015)
Changed paths:
M pkgs/development/haskell-modules/configuration-common.nix
Log Message:
-----------
haskellPackages.bindings-levmar: build with openblas
Commit: 661ce66483b8f8850f50452531e34e5b7d553389
https://github.com/NixOS/nixpkgs/commit/661ce66483b8f8850f50452531e34e5b7d553389
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-09 (Tue, 09 Jun 2015)
Changed paths:
M pkgs/development/haskell-modules/configuration-common.nix
Log Message:
-----------
haskellPackages.hmatrix: remove impure openblas path
Commit: bc3217251e4fb8dd9d648b41d963d8804a0d8f67
https://github.com/NixOS/nixpkgs/commit/bc3217251e4fb8dd9d648b41d963d8804a0d8f67
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-11 (Thu, 11 Jun 2015)
Changed paths:
M pkgs/top-level/python-packages.nix
Log Message:
-----------
pythonPackages.scikitlearn: build with openblas
Commit: 29db05132b5e0921e3fae35d62c30634e85a271f
https://github.com/NixOS/nixpkgs/commit/29db05132b5e0921e3fae35d62c30634e85a271f
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-11 (Thu, 11 Jun 2015)
Changed paths:
M pkgs/top-level/python-packages.nix
Log Message:
-----------
pythonPackages.cvxopt: build with openblas
Commit: 089f9d6486b9c0d5f27b116468ca131697ef8e16
https://github.com/NixOS/nixpkgs/commit/089f9d6486b9c0d5f27b116468ca131697ef8e16
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-11 (Thu, 11 Jun 2015)
Changed paths:
M pkgs/development/interpreters/gnu-apl/default.nix
Log Message:
-----------
gnuapl: latest version doesn't require liblapack
Commit: 74e4f6befab4514c6ee5bef7a4f3cfdae302ce68
https://github.com/NixOS/nixpkgs/commit/74e4f6befab4514c6ee5bef7a4f3cfdae302ce68
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-12 (Fri, 12 Jun 2015)
Changed paths:
M pkgs/development/libraries/science/math/ipopt/default.nix
M pkgs/top-level/all-packages.nix
Log Message:
-----------
ipopt: build with openblas
Commit: 4fb98dd6a760315f5219e15d599200271d890ef3
https://github.com/NixOS/nixpkgs/commit/4fb98dd6a760315f5219e15d599200271d890ef3
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-12 (Fri, 12 Jun 2015)
Changed paths:
M pkgs/applications/science/math/jags/default.nix
Log Message:
-----------
jags: build with openblas
Commit: c02dd4a7260f36901088830ae23d9723968ed066
https://github.com/NixOS/nixpkgs/commit/c02dd4a7260f36901088830ae23d9723968ed066
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-12 (Fri, 12 Jun 2015)
Changed paths:
M nixos/doc/manual/release-notes/rl-unstable.xml
Log Message:
-----------
Update release notes about OpenBLAS
Commit: 2a2448bcb72c0a5a367a63b0f7b8ffd3453d0e67
https://github.com/NixOS/nixpkgs/commit/2a2448bcb72c0a5a367a63b0f7b8ffd3453d0e67
Author: Thomas Tuegel <[email protected]>
Date: 2015-06-12 (Fri, 12 Jun 2015)
Changed paths:
M nixos/doc/manual/release-notes/rl-unstable.xml
M pkgs/applications/science/math/R/default.nix
M pkgs/applications/science/math/jags/default.nix
M pkgs/development/compilers/julia/0.2.nix
M pkgs/development/compilers/julia/0.3.nix
A pkgs/development/compilers/julia/0001-work-around-buggy-wcwidth.patch
M pkgs/development/haskell-modules/configuration-common.nix
M pkgs/development/interpreters/gnu-apl/default.nix
M pkgs/development/interpreters/octave/default.nix
M pkgs/development/libraries/qrupdate/default.nix
M pkgs/development/libraries/science/math/arpack/default.nix
M pkgs/development/libraries/science/math/ipopt/default.nix
R pkgs/development/libraries/science/math/openblas/0.2.10.nix
R pkgs/development/libraries/science/math/openblas/0.2.2.nix
M pkgs/development/libraries/science/math/openblas/default.nix
R
pkgs/development/libraries/science/math/suitesparse/0001-disable-metis.patch
R
pkgs/development/libraries/science/math/suitesparse/0002-set-install-dir.patch
R
pkgs/development/libraries/science/math/suitesparse/0003-blas-lapack-flags.patch
M pkgs/development/libraries/science/math/suitesparse/4.2.nix
R pkgs/development/libraries/science/math/suitesparse/SuiteSparse_config.mk
M pkgs/development/libraries/science/math/suitesparse/default.nix
R pkgs/development/libraries/science/math/suitesparse/disable-metis.patch
M pkgs/development/libraries/utf8proc/default.nix
M pkgs/development/python-modules/numpy-scipy-support.nix
M pkgs/development/r-modules/default.nix
M pkgs/development/r-modules/patches/BayesLogit_cblas.patch
M pkgs/top-level/all-packages.nix
M pkgs/top-level/python-packages.nix
Log Message:
-----------
Merge pull request #8182 from ttuegel/openblas
Numerical computing overhaul
Compare: https://github.com/NixOS/nixpkgs/compare/cb6daa036bf4...2a2448bcb72c_______________________________________________
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