I do not want to grant nix-daemon access rights to my private folder,
  otherwise other users on that machine have access to my data.
  Is there a way to build the derivation as my user and pass it to
  nix-daemon? Or does somebody has a differen aproach?

Maybe I'm misunderstanding you, but if you 'nix-prefetch-git' the
sources, it should already be there.

/Peter
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