A number of interesting emails have been sent on this issue. The most interesting appears to have been sent only to me, so I will copy it to all of you. Erik is correct. The characters are read before the EOF condition occurs. I have tested this in the two platforms that I used for the original test. I believe I can fix NMTRAN, at the points where it reads the control stream and data file, in a manner similar to what Eric suggests. Until the fix can be distributed, which may be some time if it is non-trivial, please use one of the workarounds that have been suggested, or just be careful that the last line of the control stream and data file ends with a cr-lf. Thank you all!!
On Wed, 23 May 2007 14:01:11 +0200, "Olofsen, E. (ANST)" <[EMAIL PROTECTED]> said: > Dear Alison, > > I think the text is being read, even though an end-of-file (eof) > condition occurs, but it is not printed. With > > program read > character*10 text > read (5,55,iostat=ios) text > print *,text > print *,ios > 55 format (A10) > stop > end > > it is possible to use text and check later for an eof condition. > > Could this be a solution? > > Best regards, > > Erik > > > On Tue, 2007-05-22 at 14:41 -0700, Alison Boeckmann wrote: > > This is not a bug in NM-TRAN. But I can see how it happens in > > MS-DOS. Both wordpad and notepad (unlike ms-dos edit and unix vi) will > > write a file whose last line does not terminate with cr/lf. Such a line > > is invisible to the Fortran I/O libraries that are part of g77 > > (in the MS-DOS environment) and FORTRAN 77 5.0 (in the Solaris > > environment). > > > > I tested this in both MS-DOS and Solaris with a little fortran program > > that branches to statement 10 when an end of file condition occurs. > > > > > > program read > > character*10 text > > read (5,55,end=10) text > > print *,text > > 55 format (A10) > > stop > > 10 print *,'nothing read' > > end > > > > I created a file named infile containing only "1234567890" with no cr/lf > > using notepad. I copied it to Solaris using ftp. In both environments, > > when the program is run with infile as input, it produces > > the output "nothing read". E.g., in Solaris, > > > > % f77 read.for > > read.for: > > MAIN read: > > % a.out<infile > > nothing read > > > > I don't know how to overcome this problem. Changing the format from A10 > > to (say) > > A1 or * does not help. It seems to me it is a bug (or maybe a design > > feature?) in the Fortran I/O library. > > > > > > On Tue, 22 May 2007 12:56:18 -0700, "Mark Sale - Next Level Solutions" > > <[EMAIL PROTECTED]> said: > > > Navin, If you're not getting the table file you expect, if may be > > > because NMtran (5 at least) seems to have a small bug that it will > > > sometimes ignore the last line of a control file if there isn't a > > > carriage return/line feed at the end. Try just hitting Enter after > > > the $TABLE record and saving. WRT plots, two options are Xpose from > > > the Upsala group (R/Splus, http://xpose.sourceforge.net) or an excel > > > macro from Next Level Solutions (www.nextlevelsolns.com) > > > > > > > > > > > > Mark Sale MD Next Level Solutions, LLC www.NextLevelSolns.com > > > > > > > > > > -------- Original Message -------- Subject: RE: [NMusers] No Fit > > > > file From: "Bachman, William (MYD)" <[EMAIL PROTECTED]> Date: Tue, > > > > May 22, 2007 2:48 pm To: "navin goyal" <[EMAIL PROTECTED]>, > > > > "nmusers" <[email protected]> > > > > > > > > according to your code, your run should have created a file named > > > > "drug3.sdtab". this file contains a table with these columns "ID > > > > TIME AMT MDV DV EVID CMT" and DV PRED RES WRES. You can import > > > > this file into Excel. You will have to manually create the graphs > > > > unless you have a macro that can do it. > > > > > > > > ________________________________ > > > > > > > > From: [EMAIL PROTECTED] [mailto:owner- > > > > [EMAIL PROTECTED] On Behalf Of navin goyal Sent: Tuesday, May > > > > 22, 2007 2:20 PM To: nmusers Subject: [NMusers] No Fit file > > > > > > > > > > > > Hello everybody, I am trying to run a control stream for my data > > > > using NONMEM 6. I get the output file with the objective function > > > > and other estimates. The problem is that I do not get the fit > > > > file that can be opened in excel. I guess I am missing out > > > > something in the control stream, but just cannot figure it out. > > > > Any suggestions would be appreciated The last part in the control > > > > stream is posted below > > > > > > > > > > > > $ESTIMATION METHOD=1 MAXEVAL=9999 PRINT=5 POSTHOC $COVARIANCE > > > > > > > > $TABLE ID TIME AMT MDV DV EVID CMT NOPRINT ONEHEADER > > > > FILE=drug3.sdtab > > > > > > > > thanks a lot > > > > > > > > Navin > > > > > > > > > > > > > > > > > > > > > > > > > > > > ___________________________________________________________________- > > > > ____________________________________________________________________ > > > > > > > > > > > > > > > > > > > > This e-mail transmission may contain confidential or legally > > > > privileged information that is intended only for the individual or > > > > entity named in the e-mail address. If you are not the intended > > > > recipient, you are hereby notified that any disclosure, copying, > > > > distribution, or reliance upon the contents of this e-mail is > > > > strictly prohibited. If you have received this e-mail transmission > > > > in error, please reply to the sender, so that ICON can arrange for > > > > proper delivery, and then please delete the message. Thank You. > > > -- Alison Boeckmann [EMAIL PROTECTED]
