Mark,
I reproduced the setup and your file is running fine on my side (after
we switched off all the firewalls)
Thanks for your help!
Leonid
--------------------------------------
Leonid Gibiansky, Ph.D.
President, QuantPharm LLC
web: www.quantpharm.com
e-mail: LGibiansky at quantpharm.com
tel: (301) 767 5566
On 9/8/2014 12:07 PM, Mark Sale wrote:
Leonid,
Here is mine, very poorly documented. The network name for the 2nd
computer is Worker1, this is for MPI method, run 1 exe as the manager, 5
on the same machine ("localhost") then 6 more on Worker1
The Worker1 c: drive is mapped to the o: drive on the local machine
$GENERAL
; CHANGE TOTAL NUMBER HERE
NODES=12 PARSE_TYPE=2 PARSE_NUM=200 TIMEOUTI=60 TIMEOUT=10 PARAPRINT=0
TRANSFER_TYPE=1
COMPUTERS=2
;SINGLE node: NODES=1
;MULTI node: NODES>1
;WORKER node: NODES=0
; parse_num=number of subjects to give to each node
; parse_type=0, give each node parse_num subjects
; parse_type=1, evenly distribute numbers of subjects among available nodes
; parse_type=2, load balance among nodes
; parse_type=3, assign subjects to nodes based on idranges
; parse_type=4, load balance among nodes, taking into account loading
time. Will assess ideal number of nodes.
; If loading time too costly, will eventually revert to single CPU mode.
; timeouti=seconds to wait for node to start. if not started in time,
deassign node, and give its load to next worker, until next iteration
; timeout=minutes to wait for node to compelte. if not completed by
then, deassign node, and have manager complete it.
; paraprint=1 print to console the parallel computing process. Can be
modified at runt-time with ctrl-B toggle.
; But parallel.log always records parallelization progress.
; transfer_type=0 for file transfer, 1 for mpi
$COMMANDS ;each node gets a command line, used to launch the node session
; 2:-wdir "%cd%" -n nUMWORKERS_ON_LOCAL -host localhost .\nonmem.exe -worker
1:mpiexec -wdir "%cd%" -n 1 -host localhost .\nonmem %*
2:-wdir "%cd%" -n 5 -host localhost .\nonmem.exe -worker
3:-wdir c:\nmworker\worker{#} -n 6 -host Worker1
c:\nmworker\worker{#}\nonmem.exe -worker
4:NONE
$DIRECTORIES
1-4:NONE ; FIRST DIRECTORY IS THE COMMON DIRECTORY
; O is a share drive defined from the manager computer side, pointing
to c:\ on Worker1
3:o:\nmworker\worker{#} ; NEXT SET ARE THE WORKER directories
$IDRANGES ; USED IF PARSE_TYPE=3
1:1,25
2:26,50
On Monday, September 8, 2014 11:49 AM, Leonid Gibiansky
<[email protected]> wrote:
Dear All,
We cannot force Nonmem parallel to run on two Windows 7 computers. If
anybody was able to do it (on Windows machines, with Windows 7 systems)
could you share the pnm file?
Thanks!
Leonid
--------------------------------------
Leonid Gibiansky, Ph.D.
President, QuantPharm LLC
web: www.quantpharm.com
e-mail: LGibiansky at quantpharm.com
tel: (301) 767 5566
No virus found in this message.
Checked by AVG - www.avg.com <http://www.avg.com>
Version: 2014.0.4765 / Virus Database: 4015/8175 - Release Date: 09/08/14
