Generally I abstract out my implementations and my interfaces. This means a more verbose code base, but allows me to have the renderer inserted via dependency injection. It is independent of bundling tech and I have used it with browserify as well as with AMD to great success. Decoupling those allows you to reuse interfaces on server side, but implementations will always need rewriting. If you do dep injection though only the renderer generally needs a rewrite though which is a huge win.
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