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https://issues.apache.org/jira/browse/ACCUMULO-1568?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13707582#comment-13707582
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Keith Turner commented on ACCUMULO-1568:
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[~vines], when I first implemented per-table config I arbitrarily decided to 
put each config entry in a zookeeper node.  Later this convention was followed 
for system config stored in zookeeper.  [~shickey] is currently working on 
storing namespace configs in zookeeper.

The master did have some upgrade code in place for upgrading zookeeper.   If I 
remember correctly, it writes something after the zookeeper upgrade has run 
successfully.  Should the master die in the middle, it will just run the code 
again.
                
> Make configuration changes Atomic
> ---------------------------------
>
>                 Key: ACCUMULO-1568
>                 URL: https://issues.apache.org/jira/browse/ACCUMULO-1568
>             Project: Accumulo
>          Issue Type: Bug
>            Reporter: Keith Turner
>            Assignee: John Vines
>             Fix For: 1.6.0
>
>
> I have not seen this issue, but its something I thought of.  Assume the 
> following happens.
>  * iterators I1 ... I10 are configured to Table T1 at time 1
>  * iterators NI1 ... NI10 are configured to Table T1 at time 2
>  * compaction is reading iterator config and reads I1 ... I5  and NI4 ... 
> NI9, a combination of the two iterator configurations w/o NI10, this could be 
> really bad.
> Seems like this could be solved by use of Zookeeper transactions.   The 
> Accumulo API will need to change to allow setting many iterators or config 
> settings at once.
>  
>  

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