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https://issues.apache.org/jira/browse/ACCUMULO-1819?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13806503#comment-13806503
]
Josh Elser commented on ACCUMULO-1819:
--------------------------------------
Because I'm at a loss at the moment:
{code}
g++ -v -dynamiclib -O3 -I/System/Library/Frameworks/JavaVM.framework/Headers
-I/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include
-I/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include/darwin
-I/usr/include/c++/4.2.1 -m64 -o libNativeMap-Mac_OS_X-x86_64-64.jnilib
org_apache_accumulo_server_tabletserver_NativeMap.cc util.cc
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
"/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang"
-cc1 -triple x86_64-apple-macosx10.9.0 -emit-obj -disable-free
-disable-llvm-verifier -main-file-name
org_apache_accumulo_server_tabletserver_NativeMap.cc -mrelocation-model pic
-pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu core2
-target-linker-version 224.1 -v -resource-dir
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0
-I /System/Library/Frameworks/JavaVM.framework/Headers -I
/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include -I
/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include/darwin
-I /usr/include/c++/4.2.1 -stdlib=libc++ -O3 -fdeprecated-macro
-fdebug-compilation-dir
/Users/jelser/projects/accumulo.git/server/src/main/c++/nativeMap -ferror-limit
19 -fmessage-length 208 -stack-protector 1 -mstackrealign -fblocks
-fobjc-runtime=macosx-10.9.0 -fobjc-dispatch-method=mixed
-fobjc-default-synthesize-properties -fencode-extended-block-signature
-fcxx-exceptions -fexceptions -fdiagnostics-show-option -fcolor-diagnostics -o
/var/folders/cd/x6rcp8_x0md0kkh4lppmwj600000gp/T/org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
-x c++ org_apache_accumulo_server_tabletserver_NativeMap.cc
clang -cc1 version 5.0 based upon LLVM 3.3svn default target
x86_64-apple-darwin13.0.0
ignoring nonexistent directory "/usr/include/c++/v1"
#include "..." search starts here:
#include <...> search starts here:
/System/Library/Frameworks/JavaVM.framework/Headers
/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include
/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include/darwin
/usr/include/c++/4.2.1
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1
/usr/local/include
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/include
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
In file included from org_apache_accumulo_server_tabletserver_NativeMap.cc:20:
./NativeMap.h:40:13: warning: assigning field to itself [-Wself-assign-field]
this->lba = lba;
^
1 warning generated.
"/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang"
-cc1 -triple x86_64-apple-macosx10.9.0 -emit-obj -disable-free
-disable-llvm-verifier -main-file-name util.cc -mrelocation-model pic
-pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu core2
-target-linker-version 224.1 -v -resource-dir
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0
-I /System/Library/Frameworks/JavaVM.framework/Headers -I
/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include -I
/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include/darwin
-I /usr/include/c++/4.2.1 -stdlib=libc++ -O3 -fdeprecated-macro
-fdebug-compilation-dir
/Users/jelser/projects/accumulo.git/server/src/main/c++/nativeMap -ferror-limit
19 -fmessage-length 208 -stack-protector 1 -mstackrealign -fblocks
-fobjc-runtime=macosx-10.9.0 -fobjc-dispatch-method=mixed
-fobjc-default-synthesize-properties -fencode-extended-block-signature
-fcxx-exceptions -fexceptions -fdiagnostics-show-option -fcolor-diagnostics -o
/var/folders/cd/x6rcp8_x0md0kkh4lppmwj600000gp/T/util-pTWn83.o -x c++ util.cc
clang -cc1 version 5.0 based upon LLVM 3.3svn default target
x86_64-apple-darwin13.0.0
ignoring nonexistent directory "/usr/include/c++/v1"
#include "..." search starts here:
#include <...> search starts here:
/System/Library/Frameworks/JavaVM.framework/Headers
/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include
/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home/include/darwin
/usr/include/c++/4.2.1
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1
/usr/local/include
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/include
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld"
-demangle -dynamic -dylib -arch x86_64 -macosx_version_min 10.9.0 -o
libNativeMap-Mac_OS_X-x86_64-64.jnilib
/var/folders/cd/x6rcp8_x0md0kkh4lppmwj600000gp/T/org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
/var/folders/cd/x6rcp8_x0md0kkh4lppmwj600000gp/T/util-pTWn83.o -lc++ -lSystem
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/lib/darwin/libclang_rt.osx.a
Undefined symbols for architecture x86_64:
"std::basic_ios<char, std::char_traits<char> >::widen(char) const",
referenced from:
Field::set(JNIEnv_*, _jbyteArray*, int) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
LinkedBlockAllocator::deleteLast(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
Block::rollback(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::ostream::put(char)", referenced from:
Field::set(JNIEnv_*, _jbyteArray*, int) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
LinkedBlockAllocator::deleteLast(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
Block::rollback(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::ostream::flush()", referenced from:
Field::set(JNIEnv_*, _jbyteArray*, int) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
LinkedBlockAllocator::deleteLast(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
Block::rollback(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::ostream& std::ostream::_M_insert<void const*>(void const*)", referenced
from:
LinkedBlockAllocator::deleteLast(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
Block::rollback(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::ostream::operator<<(int)", referenced from:
Field::set(JNIEnv_*, _jbyteArray*, int) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::ios_base::Init::Init()", referenced from:
__GLOBAL__I_a in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::ios_base::Init::~Init()", referenced from:
__GLOBAL__I_a in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::basic_ios<char, std::char_traits<char> >::clear(std::_Ios_Iostate)",
referenced from:
Block::rollback(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::basic_ostream<char, std::char_traits<char> >&
std::__ostream_insert<char, std::char_traits<char> >(std::basic_ostream<char,
std::char_traits<char> >&, char const*, long)", referenced from:
Field::set(JNIEnv_*, _jbyteArray*, int) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
LinkedBlockAllocator::deleteLast(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
Block::rollback(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::_Rb_tree_decrement(std::_Rb_tree_node_base*)", referenced from:
std::_Rb_tree<SubKey, std::pair<SubKey const, Field>,
std::_Select1st<std::pair<SubKey const, Field> >, std::less<SubKey>,
BlockAllocator<std::pair<SubKey const, Field> >
>::_M_insert_unique(std::pair<SubKey const, Field> const&) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
std::_Rb_tree<Field, std::pair<Field const, std::map<SubKey, Field,
std::less<SubKey>, BlockAllocator<std::pair<SubKey const, Field> > > >,
std::_Select1st<std::pair<Field const, std::map<SubKey, Field,
std::less<SubKey>, BlockAllocator<std::pair<SubKey const, Field> > > > >,
std::less<Field>, BlockAllocator<std::pair<Field const, std::map<SubKey, Field,
std::less<SubKey>, BlockAllocator<std::pair<SubKey const, Field> > > > >
>::_M_insert_unique(std::pair<Field const, std::map<SubKey, Field,
std::less<SubKey>, BlockAllocator<std::pair<SubKey const, Field> > > > const&)
in org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::_Rb_tree_increment(std::_Rb_tree_node_base*)", referenced from:
_Java_org_apache_accumulo_server_tabletserver_NativeMap_createNMI__J_3I
in org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
_Java_org_apache_accumulo_server_tabletserver_NativeMap_nmiNext in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
Iterator::Iterator(NativeMapData&, Field&, SubKey&, int*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::__throw_length_error(char const*)", referenced from:
std::vector<Block, std::allocator<Block>
>::_M_insert_aux(__gnu_cxx::__normal_iterator<Block*, std::vector<Block,
std::allocator<Block> > >, Block const&) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
std::vector<BigBlock, std::allocator<BigBlock>
>::_M_insert_aux(__gnu_cxx::__normal_iterator<BigBlock*, std::vector<BigBlock,
std::allocator<BigBlock> > >, BigBlock const&) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::_Rb_tree_insert_and_rebalance(bool, std::_Rb_tree_node_base*,
std::_Rb_tree_node_base*, std::_Rb_tree_node_base&)", referenced from:
std::_Rb_tree<SubKey, std::pair<SubKey const, Field>,
std::_Select1st<std::pair<SubKey const, Field> >, std::less<SubKey>,
BlockAllocator<std::pair<SubKey const, Field> >
>::_M_insert_unique(std::pair<SubKey const, Field> const&) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
std::_Rb_tree<Field, std::pair<Field const, std::map<SubKey, Field,
std::less<SubKey>, BlockAllocator<std::pair<SubKey const, Field> > > >,
std::_Select1st<std::pair<Field const, std::map<SubKey, Field,
std::less<SubKey>, BlockAllocator<std::pair<SubKey const, Field> > > > >,
std::less<Field>, BlockAllocator<std::pair<Field const, std::map<SubKey, Field,
std::less<SubKey>, BlockAllocator<std::pair<SubKey const, Field> > > > >
>::_M_insert_unique(std::pair<Field const, std::map<SubKey, Field,
std::less<SubKey>, BlockAllocator<std::pair<SubKey const, Field> > > > const&)
in org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
"std::cerr", referenced from:
Field::set(JNIEnv_*, _jbyteArray*, int) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
LinkedBlockAllocator::deleteLast(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
Block::rollback(void*) in
org_apache_accumulo_server_tabletserver_NativeMap-tEV7us.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [libNativeMap-Mac_OS_X-x86_64-64.jnilib] Error 1
{code}
> NativeMap Makefile doesn't work with newest OSX/Xcode
> -----------------------------------------------------
>
> Key: ACCUMULO-1819
> URL: https://issues.apache.org/jira/browse/ACCUMULO-1819
> Project: Accumulo
> Issue Type: Bug
> Components: tserver
> Affects Versions: 1.4.4, 1.5.0
> Reporter: Josh Elser
> Assignee: Josh Elser
> Fix For: 1.4.5, 1.5.1, 1.6.0
>
>
> Updated my machine from mountain lion to mavericks, which included an update
> to Xcode. After, activating the `native` maven profile caused a failure due
> to being unable to find the jni headers.
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