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• • [jira] [Updated] (CTAKES-320) Methods used by getDefaultPipeline should be able to load reasonable defaults without expecting external files. jay vyas (JIRA)
  • [jira] [Updated] (CTAKES-320) Methods used by getDefaultPipeline should be able to load reasonable defaults without expecting external files. Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-320) Methods used by getDefaultPipeline should be able to load reasonable defaults without expecting external files. Pei Chen (JIRA)
• [jira] [Created] (CTAKES-320) Methods used by getDefaultPipeline should be able to load reasonable defaults without expecting external files. jay vyas (JIRA)
• [jira] [Created] (CTAKES-319) YTEX Web Semantic Search not starting in Linux Tim OConnell (JIRA)
• [jira] [Commented] (CTAKES-316) "I do not see any" returns different ContextAnnotations in drugner pipeline Kim Ebert (JIRA)
  • [jira] [Commented] (CTAKES-316) "I do not see any" returns different ContextAnnotations in drugner pipeline Kim Ebert (JIRA)
• [jira] [Updated] (CTAKES-318) StrengthFSM incorrectly eliminates values Kim Ebert (JIRA)
• [jira] [Created] (CTAKES-318) StrengthFSM Kim Ebert (JIRA)
• [jira] [Created] (CTAKES-317) lookupConceptType may inappropriately ignore a concept if it has multiple ontology types. Kim Ebert (JIRA)
• [jira] [Created] (CTAKES-316) "I do not see any" returns different ContextAnnotations in drugner pipeline Kim Ebert (JIRA)
• Build failed in Jenkins: ctakes-trunk-compiletest #542 Apache Jenkins Server
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• Build failed in Jenkins: ctakes-trunk-compiletest » Apache cTAKES core #542 Apache Jenkins Server
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• [jira] [Updated] (CTAKES-41) cTAKES forces end of sentence at end of line Tim Miller (JIRA)
  • [jira] [Updated] (CTAKES-41) cTAKES forces end of sentence at end of line Tim Miller (JIRA)
  • [jira] [Updated] (CTAKES-41) cTAKES forces end of sentence at end of line Tim Miller (JIRA)
• [jira] [Commented] (CTAKES-41) cTAKES forces end of sentence at end of line ASF subversion and git services (JIRA)
• [jira] [Created] (CTAKES-315) Update Default UMLS pipeline to use dictionary-lookup-fast Pei Chen (JIRA)
• [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Comment Edited] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
• [jira] [Updated] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Updated] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Updated] (CTAKES-314) BigTop/Hadoop cTAKES integration Sean Finan (Jira)
• [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Tim Miller (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration Chris A. Mattmann (JIRA)
  • [jira] [Commented] (CTAKES-314) BigTop/Hadoop cTAKES integration jay vyas (JIRA)
• [jira] [Created] (CTAKES-314) BigTop/Hadoop cTAKES integration Pei Chen (JIRA)
• [jira] [Created] (CTAKES-313) Create cTAKES API Pei Chen (JIRA)
• [jira] [Commented] (CTAKES-280) upgrade to cleartk-2.* ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-280) upgrade to cleartk-2.* ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-280) upgrade to cleartk-2.* ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-280) upgrade to cleartk-2.* ASF subversion and git services (JIRA)
• [jira] [Created] (CTAKES-312) upgrade uimafit Tim Miller (JIRA)
• [jira] [Closed] (CTAKES-146) cTAKES doesn't identify SNOMED codes consistently Kim Ebert (JIRA)
• [jira] [Commented] (CTAKES-146) cTAKES doesn't identify SNOMED codes consistently Kim Ebert (JIRA)
• [jira] [Resolved] (CTAKES-310) Dictionary lookup permutations sort issue Pei Chen (JIRA)
• [jira] [Assigned] (CTAKES-311) v_document_cui_sent View returns no results in cTAKES-YTEX Pei Chen (JIRA)
• [jira] [Resolved] (CTAKES-311) v_document_cui_sent View returns no results in cTAKES-YTEX Pei Chen (JIRA)
• [jira] [Commented] (CTAKES-311) v_document_cui_sent View returns no results in cTAKES-YTEX Tim OConnell (JIRA)
  • [jira] [Commented] (CTAKES-311) v_document_cui_sent View returns no results in cTAKES-YTEX ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-311) v_document_cui_sent View returns no results in cTAKES-YTEX Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-311) v_document_cui_sent View returns no results in cTAKES-YTEX Tim OConnell (JIRA)
• [jira] [Created] (CTAKES-311) v_document_cui_sent View returns no results in cTAKES-YTEX Tim OConnell (JIRA)
• [jira] [Commented] (CTAKES-185) General cTAKES code housekeeping ASF subversion and git services (JIRA)
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• [jira] [Commented] (CTAKES-310) Dictionary lookup permutations sort issue ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-310) Dictionary lookup permutations sort issue Kim Ebert (JIRA)
• [jira] [Created] (CTAKES-310) Dictionary lookup permutations sort issue Pei Chen (JIRA)
• [jira] [Commented] (CTAKES-308) ytex unit tests fixes Pei Chen (JIRA)
  • [jira] [Commented] (CTAKES-308) ytex unit tests fixes ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-308) ytex unit tests fixes ASF subversion and git services (JIRA)
  • [jira] [Commented] (CTAKES-308) ytex unit tests fixes vijay (JIRA)
  • [jira] [Commented] (CTAKES-308) ytex unit tests fixes Alex Zbarcea (JIRA)
• [jira] [Updated] (CTAKES-308) ytex unit tests fixes Pei Chen (JIRA)
• Build failed in Jenkins: ctakes-trunk-package #254 Apache Jenkins Server
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• Build failed in Jenkins: ctakes-trunk-package » Apache cTAKES core #254 Apache Jenkins Server
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• [jira] [Resolved] (CTAKES-309) Add SNOMEDCT_US to ytext db scripts Pei Chen (JIRA)
• [jira] [Assigned] (CTAKES-309) Add SNOMEDCT_US to ytext db scripts Pei Chen (JIRA)
• [jira] [Commented] (CTAKES-309) Add SNOMEDCT_US to ytext db scripts ASF subversion and git services (JIRA)
• [jira] [Updated] (CTAKES-309) Add SNOMEDCT_US to ytext db scripts Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-309) Add SNOMEDCT_US to ytext db scripts Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-309) Add SNOMEDCT_US to ytext db scripts Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-309) Add SNOMEDCT_US to ytext db scripts Pei Chen (JIRA)
• [jira] [Created] (CTAKES-309) Add SNOMEDCT_US to ytext db scripts Pei Chen (JIRA)
• [jira] [Resolved] (CTAKES-307) URI is not hierarchical when running mvn install Pei Chen (JIRA)
• [jira] [Created] (CTAKES-308) org.apache.ctakes.ytex.umls.dao.UMLSDaoTest failure Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-307) URI is not hierarchical when running mvn install Pei Chen (JIRA)
• [jira] [Assigned] (CTAKES-307) URI is not hierarchical when running mvn install Pei Chen (JIRA)
• [jira] [Commented] (CTAKES-307) URI is not hierarchical when running mvn install ASF subversion and git services (JIRA)
• [jira] [Created] (CTAKES-307) URI is not hierarchical when running mvn install Kim Ebert (JIRA)
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• [jira] [Commented] (CTAKES-248) include original covered text of NEs which can't be recovered post if NE is from a disjoint span ASF subversion and git services (JIRA)
• [jira] [Resolved] (CTAKES-301) Create a cTAKES 3.2.0 Release Pei Chen (JIRA)
• [jira] [Created] (CTAKES-306) Unable to swap YTEX DictionaryLookupAnnotatorDB for cTAKES DictionaryLookupAnnotatorDB John T Green (JIRA)
• [jira] [Resolved] (CTAKES-305) Broken link to Maven binary in documentation James Joseph Masanz (JIRA)
• [jira] [Assigned] (CTAKES-305) Broken link to Maven binary in documentation James Joseph Masanz (JIRA)
• [jira] [Closed] (CTAKES-187) Add template filler component to fill CEM-based templates James Joseph Masanz (JIRA)
• [jira] [Created] (CTAKES-305) Broken link to Maven binary in documentation Don Naegely (JIRA)
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• Build failed in Jenkins: ctakes-trunk-compiletest » Apache cTAKES Temporal Information Extraction #514 Apache Jenkins Server
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• [jira] [Created] (CTAKES-304) Utility classes for reading/extracting word embeddings Tim Miller (JIRA)
• Build failed in Jenkins: ctakes-trunk-package #246 Apache Jenkins Server
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• [jira] [Updated] (CTAKES-303) Allow for custom dictionaries Ryan Dew (JIRA)
  • [jira] [Updated] (CTAKES-303) Allow for custom dictionaries Ryan Dew (JIRA)
  • [jira] [Updated] (CTAKES-303) Allow for custom dictionaries Ryan Dew (JIRA)
• [jira] [Created] (CTAKES-303) Allow for custom dictionaries Ryan Dew (JIRA)
• [jira] [Updated] (CTAKES-46) ctakes running problem (run cvd - ClassNotFoundException) Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-280) upgrade to cleartk-2.* Pei Chen (JIRA)
• [jira] [Resolved] (CTAKES-46) ctakes running problem (run cvd - ClassNotFoundException) Pei Chen (JIRA)
• [jira] [Resolved] (CTAKES-297) Create Factory methods for default pipeline and components Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-297) Create Factory methods for default pipeline and components Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-138) Remove 3rd party jars from our SVN Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-138) Remove 3rd party jars from our SVN Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-138) Remove 3rd party jars from our SVN Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-225) Common Type System - Add field to save preferredText in Segment Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-76) get third party dependencies into Maven Central Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-76) get third party dependencies into Maven Central Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-76) get third party dependencies into Maven Central Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-76) get third party dependencies into Maven Central James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-74) Tokenizer PennTreeBank breaks with certain apostrophes in tokens. Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-74) Tokenizer PennTreeBank breaks with certain apostrophes in tokens. Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-74) Tokenizer PennTreeBank breaks with certain apostrophes in tokens. Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-74) Tokenizer PennTreeBank breaks with certain apostrophes in tokens. James Joseph Masanz (JIRA)
• [jira] [Resolved] (CTAKES-224) Common Type System - Add field to save preferredText in IdentifiedAnnotation Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-155) SimpleSegmentWithTagsAnnotator assumes all section names are 5 characters Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-155) SimpleSegmentWithTagsAnnotator assumes all section names are 5 characters Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-155) SimpleSegmentWithTagsAnnotator assumes all section names are 5 characters Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-155) SimpleSegmentWithTagsAnnotator assumes all section names are 5 characters James Joseph Masanz (JIRA)
• [jira] [Updated] (CTAKES-189) GSoC: Implement OCR/Tika to standardize text input for cTAKES Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-172) relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-172) relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-172) relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-172) relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator James Joseph Masanz (JIRA)
  • [jira] [Updated] (CTAKES-172) relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator Sean Finan (Jira)
  • [jira] [Updated] (CTAKES-172) relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator Sean Finan (Jira)
• [jira] [Updated] (CTAKES-213) ModifierExtractorAnnotator should produce XxxxModifier subtypes Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-213) ModifierExtractorAnnotator should produce XxxxModifier subtypes Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-213) ModifierExtractorAnnotator should produce XxxxModifier subtypes Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-178) parsing of medication strength does not verify a number was discovered (strength value includes both the dosage and strength value in some cases) Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-178) parsing of medication strength does not verify a number was discovered (strength value includes both the dosage and strength value in some cases) Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-178) parsing of medication strength does not verify a number was discovered (strength value includes both the dosage and strength value in some cases) Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-188) GSoC: Create an interface for cTAKES Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-188) GSoC: Create an interface for cTAKES Sean Finan (JIRA)
  • [jira] [Updated] (CTAKES-188) GSoC: Create an interface for cTAKES Sean Finan (JIRA)
• [jira] [Updated] (CTAKES-241) NullPointerException in ctakes-assertion Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-122) include LVG with a future version of cTAKES? Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-122) include LVG with a future version of cTAKES? Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-122) include LVG with a future version of cTAKES? Pei Chen (JIRA)
• [jira] [Updated] (CTAKES-98) update our OpenNLP wrappers- write to the cTAKES TypeSystem types just via configuration Pei Chen (JIRA)
  • [jira] [Updated] (CTAKES-98) update our OpenNLP wrappers- write to the cTAKES TypeSystem types just via configuration Pei Chen (JIRA)
• [jira] [Assigned] (CTAKES-268) Fix SentenceDetector training with updated OpenNLP API Pei Chen (JIRA)
• [jira] [Resolved] (CTAKES-84) Create Regression Test Suite Pei Chen (JIRA)
• [jira] [Commented] (CTAKES-162) Command line scripts leave the user back one directory Troy Bleeker (JIRA)

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