I have a python nuke script that builds a nuke script in the GUI.

When I execute the script in the GUI, the write node writes out rgba as is my 
intent.

When I run the script from the command line, the write node does not write out 
alpha.

What setting am I missing?

Here is my code for the write node:
Out = nuke.nodes.Write(file="AOB4.%04d.jpg",inputs=[AOB])
Out[ 'channels' ].setValue( 'rgba' )

And,  yes, the inputs does have rgba values in all channels.

Below the final Out declaration in the command line version, I have this:
nuke.execute (Out,1,50,1)

Do I need to add something to the execute line to insure alpha output?

Thanks, in advance.
- Jim



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