There were two problems. First, numpy ignored my export ATLAS=/usr/local/atlas. setup.py printed out the directories it was searching and it just searched the defaults then said it couldn't find ATLAS. I 'fixed' that problem by adding symlinks in the default directories.
Now I get error messages like these in the output of setup.py: C compiler: gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/usr/include/python2.6 -c' gcc: _configtest.c _configtest.c:1: warning: conflicting types for built-in function ‘exp’ gcc -pthread _configtest.o -o _configtest _configtest.o: In function `main': /home/ia3n/Libraries/numpy/_configtest.c:6: undefined reference to `exp' collect2: ld returned 1 exit status _configtest.o: In function `main': /home/ia3n/Libraries/numpy/_configtest.c:6: undefined reference to `exp' collect2: ld returned 1 exit status failure. On Wed, Oct 20, 2010 at 9:29 AM, Gael Varoquaux < [email protected]> wrote: > On Wed, Oct 20, 2010 at 09:13:24AM -0400, Ian Goodfellow wrote: > > --with-netlib-lapack is indeed no longer valid. > > INSTALL.txt includes a warning that INSTALL.txt is out of date, you > should > > refer to doc/atlas_install.pdf instead. > > Ah, I read too quickly and missed that. Thanks. > > > The new option is --with-netlib-lapack-tarfile > > I successfully built 3.9.25 with this option a while ago, but haven't > been > > able to get numpy to use it. > > Do you remember what the issue was? > > Gaël > > _______________________________________________ > NumPy-Discussion mailing list > [email protected] > http://mail.scipy.org/mailman/listinfo/numpy-discussion > >
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