On Sun, Dec 18, 2011 at 7:48 PM, McNicol, Adam <amcni...@longroad.ac.uk>wrote:
> Hi Ralf, > > Thanks for the response. I tried reinstalling Xcode 4.2.1 and the > GCC/Fortran installer from > http://r.research.att.com/tools/(gcc-42-5666.3-darwin11.pkg) before > installing the distribute package that > you suggested. > > I then reran the numpy installer being sure to enter the three export > lines as suggested on the numpy installation guide for Lion. > > Still no success. I guess I'll just have to wait for more official support > for my configuration. > > I have included the output from terminal just in case it is useful as > there were a few lines in red that suggest something isn't quite right with > something. I have placed ** before the lines that appear in red. > > Your compile flags have "-isysroot /Developer/SDKs/MacOSX10.6.sdk" in it twice. Can you confirm you have installed this SDK? If so, I think the problem is that it appears twice. Not sure what's causing it though. Ralf I appreciate the suggestions, > > Thanks again, > > > Adam. > > running build > running config_cc > unifing config_cc, config, build_clib, build_ext, build commands > --compiler options > running config_fc > unifing config_fc, config, build_clib, build_ext, build commands > --fcompiler options > running build_src > build_src > building py_modules sources > creating build > creating build/src.macosx-10.6-intel-3.2 > creating build/src.macosx-10.6-intel-3.2/numpy > creating build/src.macosx-10.6-intel-3.2/numpy/distutils > building library "npymath" sources > customize NAGFCompiler > **Could not locate executable f95 > customize AbsoftFCompiler > **Could not locate executable f90 > **Could not locate executable f77 > customize IBMFCompiler > **Could not locate executable xlf90 > **Could not locate executable xlf > customize IntelFCompiler > **Could not locate executable fort > **Could not locate executable ifc > customize GnuFCompiler > **Could not locate executable g77 > customize Gnu95FCompiler > **Could not locate executable gfortran > customize G95FCompiler > **Could not locate executable g95 > customize PGroupFCompiler > **Could not locate executable pgf90 > **Could not locate executable pgf77 > **don't know how to compile Fortran code on platform 'posix' > C compiler: gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g > -O3 -isysroot /Developer/SDKs/MacOSX10.6.sdk -arch i386 -arch x86_64 > -isysroot /Developer/SDKs/MacOSX10.6.sdk > > compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core > -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath > -Inumpy/core/include > -I/Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m -c' > gcc-4.2: _configtest.c > gcc-4.2 _configtest.o -o _configtest > success! > removing: _configtest.c _configtest.o _configtest > customize NAGFCompiler > customize AbsoftFCompiler > customize IBMFCompiler > customize IntelFCompiler > customize GnuFCompiler > customize Gnu95FCompiler > customize G95FCompiler > customize PGroupFCompiler > **don't know how to compile Fortran code on platform 'posix' > customize NAGFCompiler > customize AbsoftFCompiler > customize IBMFCompiler > customize IntelFCompiler > customize GnuFCompiler > customize Gnu95FCompiler > customize G95FCompiler > customize PGroupFCompiler > **don't know how to compile Fortran code on platform 'posix' > C compiler: gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g > -O3 -isysroot /Developer/SDKs/MacOSX10.6.sdk -arch i386 -arch x86_64 > -isysroot /Developer/SDKs/MacOSX10.6.sdk > > compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core > -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath > -Inumpy/core/include > -I/Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m -c' > gcc-4.2: _configtest.c > _configtest.c:1: warning: conflicting types for built-in function ‘exp’ > _configtest.c:1: warning: conflicting types for built-in function ‘exp’ > gcc-4.2 _configtest.o -o _configtest > success! > removing: _configtest.c _configtest.o _configtest > creating build/src.macosx-10.6-intel-3.2/numpy/core > creating build/src.macosx-10.6-intel-3.2/numpy/core/src > creating build/src.macosx-10.6-intel-3.2/numpy/core/src/npymath > conv_template:> > build/src.macosx-10.6-intel-3.2/numpy/core/src/npymath/npy_math.c > conv_template:> > build/src.macosx-10.6-intel-3.2/numpy/core/src/npymath/ieee754.c > conv_template:> > build/src.macosx-10.6-intel-3.2/numpy/core/src/npymath/npy_math_complex.c > building extension "numpy.core._sort" sources > Generating > build/src.macosx-10.6-intel-3.2/numpy/core/include/numpy/config.h > customize NAGFCompiler > customize AbsoftFCompiler > customize IBMFCompiler > customize IntelFCompiler > customize GnuFCompiler > customize Gnu95FCompiler > customize G95FCompiler > customize PGroupFCompiler > **don't know how to compile Fortran code on platform 'posix' > customize NAGFCompiler > customize AbsoftFCompiler > customize IBMFCompiler > customize IntelFCompiler > customize GnuFCompiler > customize Gnu95FCompiler > customize G95FCompiler > customize PGroupFCompiler > **don't know how to compile Fortran code on platform 'posix' > C compiler: gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g > -O3 -isysroot /Developer/SDKs/MacOSX10.6.sdk -arch i386 -arch x86_64 > -isysroot /Developer/SDKs/MacOSX10.6.sdk > > compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core > -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath > -Inumpy/core/include > -I/Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m -c' > gcc-4.2: _configtest.c > In file included from > /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9, > from > /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73, > from _configtest.c:1: > /Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: > No such file or directory > In file included from > /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9, > from > /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73, > from _configtest.c:1: > /Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: > No such file or directory > lipo: can't figure out the architecture type of: > /var/folders/_c/z033hf1s1cgfcxtxfnpg0lsm0000gn/T//ccKv548x.out > In file included from > /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9, > from > /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73, > from _configtest.c:1: > /Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: > No such file or directory > In file included from > /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9, > from > /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73, > from _configtest.c:1: > /Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: > No such file or directory > lipo: can't figure out the architecture type of: > /var/folders/_c/z033hf1s1cgfcxtxfnpg0lsm0000gn/T//ccKv548x.out > failure. > removing: _configtest.c _configtest.o > Running from numpy source directory.Traceback (most recent call last): > File "setup.py", line 196, in <module> > setup_package() > File "setup.py", line 189, in setup_package > configuration=configuration ) > File > "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/core.py", > line 186, in setup > return old_setup(**new_attr) > File > "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/core.py", > line 148, in setup > dist.run_commands() > File > "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/dist.py", > line 917, in run_commands > self.run_command(cmd) > File > "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/dist.py", > line 936, in run_command > cmd_obj.run() > File > "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build.py", > line 37, in run > old_build.run(self) > File > "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/command/build.py", > line 126, in run > self.run_command(cmd_name) > File > "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/cmd.py", > line 313, in run_command > self.distribution.run_command(command) > File > "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/dist.py", > line 936, in run_command > cmd_obj.run() > File > "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build_src.py", > line 152, in run > self.build_sources() > File > "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build_src.py", > line 169, in build_sources > self.build_extension_sources(ext) > File > "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build_src.py", > line 328, in build_extension_sources > sources = self.generate_sources(sources, ext) > File > "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build_src.py", > line 385, in generate_sources > source = func(extension, build_dir) > File "numpy/core/setup.py", line 410, in generate_config_h > moredefs, ignored = cocache.check_types(config_cmd, ext, build_dir) > File "numpy/core/setup.py", line 41, in check_types > out = check_types(*a, **kw) > File "numpy/core/setup.py", line 271, in check_types > "Cannot compile 'Python.h'. Perhaps you need to "\ > SystemError: Cannot compile 'Python.h'. Perhaps you need to install > python-dev|python-devel. > > > > Message: 3 > Date: Sun, 18 Dec 2011 09:49:00 +0100 > From: Ralf Gommers <ralf.gomm...@googlemail.com> > Subject: Re: [Numpy-discussion] Problem installing NumPy with Python > 3.2.2/MacOS X 10.7.2 > To: Discussion of Numerical Python <numpy-discussion@scipy.org> > Message-ID: > <cabl7cqh-+t+6p5z_s_jvycrcb-fwk0q3wiawjazgmdp8ajk...@mail.gmail.com > > > Content-Type: text/plain; charset="iso-8859-1" > > On Sat, Dec 17, 2011 at 12:59 PM, McNicol, Adam <amcni...@longroad.ac.uk > >wrote: > > > ** > > > > Hi There, > > > > Thanks for the responses. > > > > At this point I would settle from just being able to install matplotlib. > > Even if some of the functionality isn't present currently that is fine. > > > > I'm afraid my knowledge of Python falls down about here as well. I > > installed Python 3.2.2 via the installer from Python.org so I have no > idea > > whether Python.h is present or where indeed I would find it or how I > would > > add it to the search path. > > > > Do I have to install from source or something like that? > > > > No, your Python install should be fine if you just got the dmg installer > from python.org. I recommend you install the OS X SDKs and distribute ( > http://pypi.python.org/pypi/distribute), as I said before, and try again > to > compile numpy. > > Unfortunately you have chosen a difficult combination of OS and Python > version, so we don't have binary installers you can use (yet). > > Ralf > > > > Thanks again, > > > > > > Adam. > > > > > > -----Original Message----- > > From: McNicol, Adam > > Sent: Fri 12/16/2011 11:07 PM > > To: numpy-discussion@scipy.org > > Subject: Problem installing NumPy with Python 3.2.2/MacOS X 10.7.2 > > > > Hi There, > > > > I am very new to numpy and have really only started investigating it as > > one of my students needs some functionality from matplotlib. I have > managed > > to install everything under Windows for work in class but I use a Mac at > > home and have been struggling all night to get it to build and install. > > > > I should mention that I am using Python 3.2.2 both in school and at home > > and it isn't an option to use Python 2.7 as all of the rest of my class > is > > taught in Python 3. I also have the most recent version of Xcode > installed. > > > > I have installed the correct build of gcc-4.2 with Fortran (gcc-4.2 > (Apple > > build 5666.3) with GNU Fortran 4.2.4 for Mac OS X 10.7 (Lion)) from > > http://r.research.att.com/tools/ > > > > I then followed the install instructions but the build fails with the > > following message: > > > > File "numpy/core/setup.py", line 271, in check_types > > "Cannot compile 'Python.h'. Perhaps you need to "\ > > SystemError: Cannot compile 'Python.h'. Perhaps you need to install > > python-dev|python-devel. > > > > I have got no idea what to do with this error message. Any help would be > > much appreciated. > > > > Kind Regards, > > > > > > Adam. > > > > > > _______________________________________________ > > NumPy-Discussion mailing list > > NumPy-Discussion@scipy.org > > http://mail.scipy.org/mailman/listinfo/numpy-discussion > > > > > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > http://mail.scipy.org/pipermail/numpy-discussion/attachments/20111218/0747fb12/attachment-0001.html > > ------------------------------ > > _______________________________________________ > NumPy-Discussion mailing list > NumPy-Discussion@scipy.org > http://mail.scipy.org/mailman/listinfo/numpy-discussion > > > End of NumPy-Discussion Digest, Vol 63, Issue 54 > ************************************************ > > > _______________________________________________ > NumPy-Discussion mailing list > NumPy-Discussion@scipy.org > http://mail.scipy.org/mailman/listinfo/numpy-discussion > >
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