Hi Marek, These are the exact steps I took:
1. cloned the repository in /numenta2/nupic 2. pip installed all requirements 3. create .bashrc file in /numenta2 like the following: export NUPIC=~/nupic export NTA=$NUPIC/build/release export NTA_ROOTDIR=$NTA export PYTHONPATH=$PYTHONPATH:$NTA/lib/python2.7/site-packages 4. source .bashrc 5.generated build files: mkdir -p $NUPIC/build/scripts cd $NUPIC/build/scripts 6. make clean 7. cmake $NUPIC 8. make -j3 and then received the error as described in my other message. Thank you for your help, Matt On Fri, Apr 18, 2014 at 9:00 AM, <[email protected]> wrote: > Send nupic mailing list submissions to > [email protected] > > To subscribe or unsubscribe, visit > http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > or, via email, send a message with subject or body 'help' to > [email protected] > > You can reach the person managing the list at > [email protected] > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of nupic digest..." > > > Today's Topics: > > 1. PR/Social media: NuPIC on Reasearchgate (Marek Otahal) > 2. Re: PR/Social media: NuPIC on Reasearchgate (Aseem Hegshetye) > 3. Re: PR/Social media: NuPIC on Reasearchgate (Dean Horak) > 4. Install Make Error (Matt Roesener) > 5. Re: PR/Social media: NuPIC on Reasearchgate (Marek Otahal) > 6. Re: Install Make Error (Marek Otahal) > 7. Re: PR/Social media: NuPIC on Reasearchgate (Marek Otahal) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Fri, 18 Apr 2014 01:26:42 +0200 > From: Marek Otahal <[email protected]> > To: "NuPIC general mailing list." <[email protected]> > Subject: [nupic-discuss] PR/Social media: NuPIC on Reasearchgate > Message-ID: > <CACh1_Rp_2ZPN= > [email protected]> > Content-Type: text/plain; charset="utf-8" > > Hi Matt, guys, > > I just stumbled upon https://www.researchgate.net , some kind of "facebook > for (bored) scientists" as it seems. I think it would be a great place to > present Nupic (as organization, forums, publish avail papers (ppl can even > review them there!)). This could get us many curious eyeballs! :) > > Cheers, Mark > > -- > Marek Otahal :o) > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: < > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140418/d81f2d2a/attachment-0001.html > > > > ------------------------------ > > Message: 2 > Date: Thu, 17 Apr 2014 19:10:20 -0500 (CDT) > From: Aseem Hegshetye <[email protected]> > To: "NuPIC general mailing list." <[email protected]> > Subject: Re: [nupic-discuss] PR/Social media: NuPIC on Reasearchgate > Message-ID: > <[email protected]> > Content-Type: text/plain; charset=utf-8 > > Hi, > this looks cool.. > I signed up! > thanks > > > > ------------------------------ > > Message: 3 > Date: Thu, 17 Apr 2014 19:13:24 -0500 > From: Dean Horak <[email protected]> > To: "NuPIC general mailing list." <[email protected]> > Subject: Re: [nupic-discuss] PR/Social media: NuPIC on Reasearchgate > Message-ID: > <CAPW5hGDVfJPZ91aNpmwNck_= > [email protected]> > Content-Type: text/plain; charset="utf-8" > > Unfortunately, this is for academia only (AFAIK). Only academic or research > institutions are accepted (i.e. .edu email addresses). > > Dean > > > On Thu, Apr 17, 2014 at 7:10 PM, Aseem Hegshetye <[email protected] > >wrote: > > > Hi, > > this looks cool.. > > I signed up! > > thanks > > > > _______________________________________________ > > nupic mailing list > > [email protected] > > http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > > > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: < > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140417/83200143/attachment-0001.html > > > > ------------------------------ > > Message: 4 > Date: Thu, 17 Apr 2014 19:22:42 -0700 > From: Matt Roesener <[email protected]> > To: "[email protected]" <[email protected]> > Subject: [nupic-discuss] Install Make Error > Message-ID: > < > canbjx7dn-q3afhfpcwqy_foqencraz5tirnpqndz5qctdpy...@mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > Hi Guys, > > I'm still raising an error after I follow the readme instructions. After I > install all dependencies change my .bashrc file to the following, and > generate build files. > > export NUPIC=~/nupic > export NTA=$NUPIC/build/release > export NTA_ROOTDIR=$NTA > export PYTHONPATH=$PYTHONPATH:$NTA/lib/python2.7/site-packages > > > I receive the following error: > > [ 0%] Building CXX object > lang/py/support/CMakeFiles/libsupport.dir/NumpyVector.cpp.o > > [ 1%] Building CXX object > nta/math/CMakeFiles/libmath.dir/SparseMatrixAlgorithms.cpp.o > > [ 2%] Building CXX object > nta/algorithms/CMakeFiles/libalgorithms.dir/bit_history.cpp.o > > clang: error: no input files > > /bin/sh: -DNDEBUG: command not found > > clang: error: no input files > > /bin/sh: -fPIC: command not found > > make[2]: *** [lang/py/support/CMakeFiles/libsupport.dir/NumpyVector.cpp.o] > Error 127 > > /bin/sh: -DNDEBUG: command not found > > make[1]: *** [lang/py/support/CMakeFiles/libsupport.dir/all] Error 2 > > make[1]: *** Waiting for unfinished jobs.... > > /bin/sh: -fPIC: command not found > > make[2]: *** [nta/math/CMakeFiles/libmath.dir/SparseMatrixAlgorithms.cpp.o] > Error 127 > > make[2]: *** Waiting for unfinished jobs.... > > [ 3%] [ 4%] Building CXX object > nta/algorithms/CMakeFiles/libalgorithms.dir/Cell.cpp.o > > Building CXX object nta/math/CMakeFiles/libmath.dir/stl_io.cpp.o > > clangclang: error: no input files > > : error: no input files > > /bin/sh: -DNDEBUG: command not found > > /bin/sh: -DNDEBUG: command not found > > /bin/sh: -fPIC: command not found > > /bin/sh: -fPIC: command not found > > make[2]: *** [nta/math/CMakeFiles/libmath.dir/stl_io.cpp.o] Error 127 > > make[2]: *** [nta/algorithms/CMakeFiles/libalgorithms.dir/Cell.cpp.o] Error > 127 > > make[2]: *** Waiting for unfinished jobs.... > > make[1]: *** [nta/math/CMakeFiles/libmath.dir/all] Error 2 > > clang: error: no input files > > /bin/sh: -DNDEBUG: command not found > > /bin/sh: -fPIC: command not found > > make[2]: *** > [nta/algorithms/CMakeFiles/libalgorithms.dir/bit_history.cpp.o] Error 127 > > make[1]: *** [nta/algorithms/CMakeFiles/libalgorithms.dir/all] Error 2 > > make: *** [all] Error 2 > > > Any idea why this is so? I understand we are planning to move towards a pip > install. This would we be awesome. Wondering if I should just wait. > > > Thanks, > > > Matt > > > > On Thu, Apr 17, 2014 at 7:42 AM, <[email protected]> wrote: > > > Send nupic mailing list submissions to > > [email protected] > > > > To subscribe or unsubscribe, visit > > > http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > > or, via email, send a message with subject or body 'help' to > > [email protected] > > > > You can reach the person managing the list at > > [email protected] > > > > When replying, please edit your Subject line so it is more specific > > than "Re: Contents of nupic digest..." > > > > > > Today's Topics: > > > > 1. Re: Any examples of how to use NuPic for classification > > (Rajesh Nikam) > > 2. Re: 'Noise' in time (Scheele, Manuel) > > 3. SP for clustering (Nicholas Mitri) > > > > > > ---------------------------------------------------------------------- > > > > Message: 1 > > Date: Thu, 17 Apr 2014 10:30:16 +0530 > > From: Rajesh Nikam <[email protected]> > > To: "NuPIC general mailing list." <[email protected]> > > Subject: Re: [nupic-discuss] Any examples of how to use NuPic for > > classification > > Message-ID: > > < > > ca+gxrddfypbc6cm3c20gh-tmhmuxesn8dcgzcr1uwk6fyfp...@mail.gmail.com> > > Content-Type: text/plain; charset="utf-8" > > > > Hi Mark, > > > > Thanks for update. > > > > Rajesh > > > > > > On Tue, Apr 15, 2014 at 3:34 PM, Marek Otahal <[email protected]> > > wrote: > > > > > Hi Rajesh, > > > > > > like Matt said. However, I'm working on some. You can achieve the goal > by > > > exercising the abilities of SP: assign a label to your data, train it. > > and > > > then predict the missing (label) value in testing. Use my > > > https://github.com/numenta/nupic/pull/407 of that. > > > > > > I hope to come back later with an example. > > > Cheers, Mark > > > > > > > > > On Sat, Apr 5, 2014 at 1:15 PM, Rajesh Nikam <[email protected] > > >wrote: > > > > > >> Hi NuPic, > > >> > > >> Do you have examples of how to use NuPic for classification ? > > >> > > >> Thanks, > > >> Rajesh > > >> > > >> > > >> > > >> _______________________________________________ > > >> nupic mailing list > > >> [email protected] > > >> http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > > >> > > >> > > > > > > > > > -- > > > Marek Otahal :o) > > > > > > _______________________________________________ > > > nupic mailing list > > > [email protected] > > > http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > > > > > > > > -------------- next part -------------- > > An HTML attachment was scrubbed... > > URL: < > > > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140417/47b34c4a/attachment-0001.html > > > > > > > ------------------------------ > > > > Message: 2 > > Date: Thu, 17 Apr 2014 09:26:39 +0000 > > From: "Scheele, Manuel" <[email protected]> > > To: NuPIC general mailing list. <[email protected]> > > Subject: Re: [nupic-discuss] 'Noise' in time > > Message-ID: > > <[email protected]> > > Content-Type: text/plain; charset="utf-8" > > > > Hi guys, > > > > Thanks for the input. I was a bit worried why nobody had tried to answer > > my question. Here are my thoughts on your responses: > > > > Julie says: > > [..], I suspect that to account for noise in the duration of a particular > > pattern, you would want to have a coarser grained aggregation of your > input > > values when swarming. There are aggregation params in the model > (although I > > can't remember ATM precisely what they're called). As long as the > > aggregation is mostly covering the noise, I think this would work. > > > > This is an interesting solution. I will think about this, but currently I > > see the problem of finding the right aggregation value. The ?noise? may > > lead to a halt in the sequence of 10 steps (in which case aggregating 10 > > steps would get rid of all noise) or of 1 step (in which case aggregating > > 10 steps would lead to a loss of information). I am still thinking of the > > input as a speech signal and having faster and slower speakers. > > > > Sergey says: > > My understanding is that variability in what you refer to as "noise in > the > > time domain" is handled not by a region, but by the hierarchy. > > > > This was my thought as well. The problem is that the current NuPIC models > > don?t feature hierarchy. CLAModel for example only features a SP, TP and > > classifier. I have been meaning to find out how to build a proper network > > with many layers of CLAModel instances, but haven?t had the time. I am > > wondering about how the current NuPIC project would deal with it or > whether > > it can do it at all. > > > > BTW, if someone knows how to build larger networks or is interested in > > building one with me, let me know ;) > > > > Regards, > > Manuel > > > > > > > > From: nupic [mailto:[email protected]] On Behalf Of Sergey > > Alexashenko > > Sent: 16 April 2014 22:08 > > To: NuPIC general mailing list. > > Subject: Re: [nupic-discuss] 'Noise' in time > > > > Hello all, > > > > My understanding is that variability in what you refer to as "noise in > the > > time domain" is handled not by a region, but by the hierarchy. Consider > the > > following example: > > > > You are at a Gnarls Barkley concert. He is performing "Crazy". You know > > the song very well and are familiar both with the lyrics and the pace of > > it. However, you have learned the song by listening to the same recording > > over and over again. > > > > Gnarls Barkley sings "I remember when, I remember, I remember when" and > > you know that the sound to come is "I lost my mind". You also know when > > that sound is supposed to enter your hearing. However, this being a live > > show, Gnarls Barkley makes a pause slightly longer than the one you > > remember from the recording. Here's what happens in your brain: > > On some lower auditory level (A1?), the prediction of hearing the exact > > sounds you were expecting is not correct. But on a layer slightly higher > in > > the hierarchy, there is awareness that you are at a Gnarls Barkley > concert, > > that he is singing Crazy and that the next words are "I lost my mind". As > > such, the higher region, to which the exception is escalated, sends down > > the same sensory prediction it was expecting a moment ago. It will do so > > for a period of time until the anomaly is so large that you might suspect > > that Gnarls Barkley has stopped singing for some reason. As such, when > > Gnarls Barkley ends his pause, the lower region will get the sensory > input > > and the prediction from a higher region that match. > > > > Cheers, > > > > Sergey > > > > P.S. Sorry if this response gets sent twice, I used an email address, > > which is not subscribed to the list in my first response. > > > > On Wed, Apr 16, 2014 at 12:40 PM, Julie Pitt <[email protected]<mailto: > > [email protected]>> wrote: > > A NuPIC novice myself, I suspect that to account for noise in the > duration > > of a particular pattern, you would want to have a coarser grained > > aggregation of your input values when swarming. There are aggregation > > params in the model (although I can't remember ATM precisely what they're > > called). As long as the aggregation is mostly covering the noise, I think > > this would work. > > > > Interestingly, in How to Create a Mind, Ray Kurzweil discusses the > problem > > of variation in duration of an input pattern, using speech sounds as an > > example. His model is a bit different from CLA/HTM, and he models inputs > > with an expected range for the duration. > > > > On Tue, Apr 8, 2014 at 1:28 AM, Scheele, Manuel < > > [email protected]<mailto:[email protected]>> > > wrote: > > Hi all, > > > > I have been semi-successful with learning sequences and recognising noisy > > versions of them using NuPIC. > > > > But now I am curious about something else. What if the noise is not in > the > > sequence values (i.e. [1, 3, 4] plus noise becomes [1.1, 2.9, 4.05]) but > in > > the 'time domain' (i.e. [1, 1, 2, 2, 5, 5, 5] plus noise becomes [1, 1, > 1, > > 2, 5, 5]) meaning where the transitions between sequence values are the > > same but the 'time' spend in one sequence state varies? > > > > This happens, for example, when we speak: we we spend different amounts > of > > time in different parts of a word depending on the speed of our speech. > > Does the TP deal with this? How can I see if NuPIC can deal with this > sort > > of problem and if so, how well? > > > > Regards, > > Manuel > > _______________________________________________ > > nupic mailing list > > [email protected]<mailto:[email protected]> > > http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > > > > > > _______________________________________________ > > nupic mailing list > > [email protected]<mailto:[email protected]> > > http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > > > > -------------- next part -------------- > > An HTML attachment was scrubbed... > > URL: < > > > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140417/954900e8/attachment-0001.html > > > > > > > ------------------------------ > > > > Message: 3 > > Date: Thu, 17 Apr 2014 17:41:45 +0300 > > From: Nicholas Mitri <[email protected]> > > To: "NuPIC general mailing list." <[email protected]> > > Subject: [nupic-discuss] SP for clustering > > Message-ID: <[email protected]> > > Content-Type: text/plain; charset="windows-1252" > > > > Hello all. > > > > I just completed a rough draft (and by rough I mean rough!) of a document > > on evaluating the spatial pooler as a clustering algorithm. > > I?m attaching the document here for your thoughts or in case anyone is > > interested. > > Please excuse any inaccuracies or typos. I?ll refine it on the second > pass > > before considering adding it to my thesis. > > > > best, > > Nick > > > > > > -------------- next part -------------- > > A non-text attachment was scrubbed... > > Name: Spatial Pooler.pdf > > Type: application/pdf > > Size: 846832 bytes > > Desc: not available > > URL: < > > > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140417/77fab591/attachment.pdf > > > > > > > ------------------------------ > > > > Subject: Digest Footer > > > > _______________________________________________ > > nupic mailing list > > [email protected] > > http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > > > > > > ------------------------------ > > > > End of nupic Digest, Vol 12, Issue 52 > > ************************************* > > > > > > -- > Regards, > > Matthew W. Roesener > Tel: +808.542.9978 > Email: [email protected] > LinkedIn: http://www.linkedin.com/in/matthewroesener > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: < > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140417/7477755b/attachment-0001.html > > > > ------------------------------ > > Message: 5 > Date: Fri, 18 Apr 2014 10:04:23 +0200 > From: Marek Otahal <[email protected]> > To: "NuPIC general mailing list." <[email protected]> > Subject: Re: [nupic-discuss] PR/Social media: NuPIC on Reasearchgate > Message-ID: > < > cach1_rr8wv1n_czkwt-xvlznjhqukiaal_2dzc25hpawjhw...@mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > > Unfortunately, this is for academia only (AFAIK). Only academic or > research institutions are accepted (i.e. .edu email addresses). > > Didn't know that, thanks. That's bad, as many enthusiasts would definitely > be interested. > Still, I think Numenta could apply then to be registered as a research > institution there. > > Cheers and happy Easter everybody! > > -- > Marek Otahal :o) > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: < > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140418/2c9be22d/attachment-0001.html > > > > ------------------------------ > > Message: 6 > Date: Fri, 18 Apr 2014 10:08:14 +0200 > From: Marek Otahal <[email protected]> > To: "NuPIC general mailing list." <[email protected]> > Subject: Re: [nupic-discuss] Install Make Error > Message-ID: > < > cach1_rof8b8wbjr8mwynxtg43hvcmsh80cpvgnfxjy0vg8d...@mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > Hi Matt, > > did you run `source ~/.bashrc` or log off/in? > We can help you more if you describe the steps you take.. > Cheers, Mark > > -- > Marek Otahal :o) > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: < > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140418/59bc9d20/attachment-0001.html > > > > ------------------------------ > > Message: 7 > Date: Fri, 18 Apr 2014 11:55:17 +0200 > From: Marek Otahal <[email protected]> > To: "NuPIC general mailing list." <[email protected]> > Subject: Re: [nupic-discuss] PR/Social media: NuPIC on Reasearchgate > Message-ID: > < > cach1_rr5nomwtj0a0tzwbtpvqztetjcd83mmcrbaowwdx1v...@mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > it could still be possible: > > ResearchGate is a network intended for scientific and academic exchange. We > therefore ask that you sign up with your institution email address. > > We only require this address as a verification, you can change your email > address after sign up. > > If you have an institution email address we don't recognize, please request > an account and we'll get back to you as soon as possible. > > Or we could create some kind of shared acc for the numenta community. > > > On Fri, Apr 18, 2014 at 10:04 AM, Marek Otahal <[email protected]> > wrote: > > > > Unfortunately, this is for academia only (AFAIK). Only academic or > > research institutions are accepted (i.e. .edu email addresses). > > > > Didn't know that, thanks. That's bad, as many enthusiasts would > definitely > > be interested. > > Still, I think Numenta could apply then to be registered as a research > > institution there. > > > > Cheers and happy Easter everybody! > > > > -- > > Marek Otahal :o) > > > > > > -- > Marek Otahal :o) > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: < > http://lists.numenta.org/pipermail/nupic_lists.numenta.org/attachments/20140418/4b58d2ad/attachment-0001.html > > > > ------------------------------ > > Subject: Digest Footer > > _______________________________________________ > nupic mailing list > [email protected] > http://lists.numenta.org/mailman/listinfo/nupic_lists.numenta.org > > > ------------------------------ > > End of nupic Digest, Vol 12, Issue 53 > ************************************* > -- Regards, Matthew W. Roesener Tel: +808.542.9978 Email: [email protected] LinkedIn: http://www.linkedin.com/in/matthewroesener
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