Thanks very much, Matthew. This will help many people.

John

On Tue, Jul 14, 2015 at 5:35 PM, Matthew Taylor <[email protected]> wrote:
> Fixed! http://numenta.org/docs/nupic/
> ---------
> Matt Taylor
> OS Community Flag-Bearer
> Numenta
>
>
> On Tue, Jul 14, 2015 at 9:23 AM, John Blackburn
> <[email protected]> wrote:
>> Looks like it might be time to run doxygen again! Last run in May 19.
>>
>> John.
>>
>> On Tue, Jul 14, 2015 at 5:14 PM, cogmission (David Ray)
>> <[email protected]> wrote:
>>> Hey John,
>>>
>>> Nice self-sufficient researching! I like that in ya' !!!
>>>
>>> Anyway, yes that last (stripNeverLearned) parameter was recently removed
>>> last month. The file I gave you is older than that...
>>>
>>> Remember, NuPIC is ever evolving, and it is still technically "pre-release"!
>>>
>>> ;-)
>>>
>>>
>>>
>>> On Tue, Jul 14, 2015 at 11:09 AM, John Blackburn
>>> <[email protected]> wrote:
>>>>
>>>> Thanks, Ralf,
>>>>
>>>> Actually that reminds me, David Ray kindly sent me the QuickTest.py
>>>> example in Python so I just tried that. However, I ran into another
>>>> problem: there seems to be some confusion about how many parameters
>>>> sp.compute() takes (Spatial Pooler). In QuickTest.py the code reads
>>>>
>>>> sp.compute(encoding, True, output, False)
>>>>
>>>> However, on Github sp.compute takes only 3 parameters (apart from self):
>>>>
>>>>
>>>> https://github.com/numenta/nupic/blob/master/nupic/research/spatial_pooler.py#L658
>>>>
>>>> So this causes a crash. I notice on the API docs the 4th parameter is
>>>> indeed mentioned:
>>>>
>>>>
>>>> http://numenta.org/docs/nupic/classnupic_1_1research_1_1spatial__pooler_1_1_spatial_pooler.html#aaa2084b96999fb1734fd2f330bfa01a6
>>>>
>>>> So I guess the 4th arg was recently removed. Pretty confusing!
>>>>
>>>> Can anyone shed light on this mystery?
>>>>
>>>> John.
>>>>
>>>> On Tue, Jul 14, 2015 at 12:25 PM, Ralf Seliger <[email protected]> wrote:
>>>> > Hey John,
>>>> >
>>>> > why don't you try the QuickTest example in htm.java
>>>> > (https://github.com/numenta/htm.java) or htm.JavaScript
>>>> > (https://github.com/nupic-community/htm.JavaScript)? It involves the new
>>>> > temporal memory, and stepping through the code with a debugger you can
>>>> > easily study the inner workings of th algorithm.
>>>> >
>>>> > Regards, RS
>>>> >
>>>> >
>>>> > Am 14.07.2015 um 11:39 schrieb John Blackburn:
>>>> >>
>>>> >> Thanks, Chetan,
>>>> >>
>>>> >> Any tutorials, examples of how to use temporal_memory.py? The nice
>>>> >> thing about old TP is it has an example: hello_tp.py.
>>>> >>
>>>> >> John.
>>>> >>
>>>> >> On Mon, Jul 13, 2015 at 7:55 PM, Chetan Surpur <[email protected]>
>>>> >> wrote:
>>>> >>>
>>>> >>> Hi John,
>>>> >>>
>>>> >>> The TP is now called "Temporal Memory", and there's a new
>>>> >>> implementation
>>>> >>> of
>>>> >>> it in NuPIC [1]. Please use this latest version instead, and let us
>>>> >>> know
>>>> >>> if
>>>> >>> you still find issues with the results.
>>>> >>>
>>>> >>> [1]
>>>> >>>
>>>> >>>
>>>> >>> https://github.com/numenta/nupic/blob/master/nupic/research/temporal_memory.py
>>>> >>>
>>>> >>> Thanks,
>>>> >>> Chetan
>>>> >>>
>>>> >>> On Jul 13, 2015, at 4:44 AM, John Blackburn
>>>> >>> <[email protected]>
>>>> >>> wrote:
>>>> >>>
>>>> >>> Dear All
>>>> >>>
>>>> >>> I'm trying to use the temporal pooler (TP) directly as I want to get
>>>> >>> into the details of how Nupic works (rather than high level OPF etc)
>>>> >>>
>>>> >>> Having trained the TP I used this code to get some predictions:
>>>> >>>
>>>> >>> for j in range(10):
>>>> >>>     x=2*math.pi/100*j
>>>> >>>     y=math.sin(x)
>>>> >>>
>>>> >>>     print "Time step:",j
>>>> >>>
>>>> >>>     for k in range(nIntervals):
>>>> >>>         if y>=ybot[k] and y<ytop[k]:
>>>> >>>             print "input=",x,y,k,rep[k,:]
>>>> >>>
>>>> >>> tp.compute(rep[k,:],enableLearn=False,computeInfOutput=True)
>>>> >>>             tp.printStates(printPrevious = False, printLearnState =
>>>> >>> False)
>>>> >>>             break
>>>> >>>
>>>> >>>
>>>> >>> Here is the result I got:
>>>> >>>
>>>> >>> Time step: 0
>>>> >>> input= 0.0 0.0 9 [0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0]
>>>> >>>
>>>> >>> Inference Active state
>>>> >>> 0000000001 0000000000
>>>> >>> 0000000000 0000000000
>>>> >>> Inference Predicted state
>>>> >>> 0000000000 0000000000
>>>> >>> 0000000001 0000000000
>>>> >>> Time step: 1
>>>> >>> input= 0.0628318530718 0.0627905195293 10 [0 0 0 0 0 0 0 0 0 0 1 0 0 0
>>>> >>> 0 0 0 0 0 0]
>>>> >>>
>>>> >>> Inference Active state
>>>> >>> 0000000000 1000000000
>>>> >>> 0000000000 0000000000
>>>> >>> Inference Predicted state
>>>> >>> 0000000000 0000000000
>>>> >>> 0000000001 0000000000
>>>> >>> Time step: 2
>>>> >>> input= 0.125663706144 0.125333233564 11 [0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
>>>> >>> 0 0 0 0 0]
>>>> >>>
>>>> >>> Inference Active state
>>>> >>> 0000000000 0100000000
>>>> >>> 0000000000 0100000000
>>>> >>> Inference Predicted state
>>>> >>> 0000000000 0000000000
>>>> >>> 0000000000 1110000000
>>>> >>> Time step: 3
>>>> >>> input= 0.188495559215 0.187381314586 11 [0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
>>>> >>> 0 0 0 0 0]
>>>> >>>
>>>> >>> Inference Active state
>>>> >>> 0000000000 0000000000
>>>> >>> 0000000000 0100000000
>>>> >>> Inference Predicted state
>>>> >>> 0000000000 0000000000
>>>> >>> 0000000000 1110000000
>>>> >>>
>>>> >>> You can see that in time step 3, one cell (12th column) is shown as
>>>> >>> being both in the active and predictive state, which I though was
>>>> >>> impossible. (its inference active state is 1 and its inference
>>>> >>> predicated state is 1)
>>>> >>>
>>>> >>> Also if you look at time step 0, only 1 cell is in the predictive
>>>> >>> state. However, the input that comes in at time step 1 activates the
>>>> >>> colum to the right of this cell (the 11th slot is "1") so I would
>>>> >>> expect the 11th column to have both cells active, the "unexpected
>>>> >>> input state" but this does not happen.
>>>> >>>
>>>> >>> Can anyone explain this?
>>>> >>>
>>>> >>> John.
>>>> >>>
>>>> >>>
>>>> >
>>>> >
>>>>
>>>
>>>
>>>
>>> --
>>> With kind regards,
>>>
>>> David Ray
>>> Java Solutions Architect
>>>
>>> Cortical.io
>>> Sponsor of:  HTM.java
>>>
>>> [email protected]
>>> http://cortical.io
>>
>

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