Carlo,
If I repeat the same exercise with 1.0.2, I get the following results.
Best regards,
Sukanta
octave:8> pkg install -verbose openmpi_ext-1.0.2.tar.gz
mkdir (/tmp/oct-yuizPX)
untar (openmpi_ext-1.0.2.tar.gz, /tmp/oct-yuizPX)
make: Entering directory `/tmp/oct-yuizPX/openmpi_ext/src'
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Init.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Initialized.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Comm_rank.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Comm_size.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Finalize.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Finalized.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Send.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Recv.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Iprobe.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Probe.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Barrier.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Comm_Load.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Comm_Test.cc
mkoctfile -s -I/usr/lib/openmpi/include
-I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
-lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
-lutil -lm -ldl MPI_Get_processor_name.cc
make: Leaving directory `/tmp/oct-yuizPX/openmpi_ext/src'
copyfile /tmp/oct-yuizPX/openmpi_ext/src/MPI_Barrier.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Comm_Load.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Comm_Test.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Comm_rank.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Comm_size.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Finalize.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Finalized.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Get_processor_name.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Init.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Initialized.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Iprobe.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Probe.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Recv.oct
/tmp/oct-yuizPX/openmpi_ext/src/MPI_Send.oct
/tmp/oct-yuizPX/openmpi_ext/inst/x86_64-pc-linux-gnu-api-v37
octave:9> ver
----------------------------------------------------------------------
GNU Octave Version 3.2.4
GNU Octave License: GNU General Public License
Operating System: Linux 3.2.0-29-generic #46-Ubuntu SMP Fri Jul 27
17:03:23 UTC 2012 x86_64
----------------------------------------------------------------------
Package Name | Version | Installation directory
-------------------+---------+-----------------------
benchmark | 1.1.1 | /usr/share/octave/packages/3.2/benchmark-1.1.1
communications *| 1.0.10 |
/usr/share/octave/packages/3.2/communications-1.0.10
control *| 1.0.11 | /usr/share/octave/packages/3.2/control-1.0.11
data-smoothing *| 1.2.3 |
/usr/share/octave/packages/3.2/data-smoothing-1.2.3
econometrics *| 1.0.8 | /usr/share/octave/packages/3.2/econometrics-1.0.8
financial *| 0.3.2 | /usr/share/octave/packages/3.2/financial-0.3.2
ga *| 0.9.8 | /usr/share/octave/packages/3.2/ga-0.9.8
general *| 1.2.2 | /usr/share/octave/packages/3.2/general-1.2.2
gsl *| 1.0.8 | /usr/share/octave/packages/3.2/gsl-1.0.8
image *| 1.0.14 | /usr/share/octave/packages/3.2/image-1.0.14
io *| 1.0.14 | /usr/share/octave/packages/3.2/io-1.0.14
java *| 1.2.8 | /usr/share/octave/packages/3.2/java-1.2.8
linear-algebra *| 2.1.0 |
/usr/share/octave/packages/3.2/linear-algebra-2.1.0
mapping *| 1.0.7 | /usr/share/octave/packages/3.2/mapping-1.0.7
miscellaneous *| 1.0.11 |
/usr/share/octave/packages/3.2/miscellaneous-1.0.11
missing-functions *| 1.0.2 |
/usr/share/octave/packages/3.2/missing-functions-1.0.2
nan *| 2.4.4 | /usr/share/octave/packages/3.2/nan-2.4.4
nnet *| 0.1.13 | /usr/share/octave/packages/3.2/nnet-0.1.13
octcdf *| 1.0.13 | /usr/share/octave/packages/3.2/octcdf-1.0.13
octgpr *| 1.2.0 | /usr/share/octave/packages/3.2/octgpr-1.2.0
odepkg *| 0.6.12 | /usr/share/octave/packages/3.2/odepkg-0.6.12
openmpi_ext *| 1.0.2 | /usr/share/octave/packages/3.2/openmpi_ext-1.0.2
optim *| 1.0.17 | /usr/share/octave/packages/3.2/optim-1.0.17
optiminterp *| 0.3.3 | /usr/share/octave/packages/3.2/optiminterp-0.3.3
parallel *| 2.0.5 | /usr/share/octave/packages/3.2/parallel-2.0.5
plot *| 1.0.8 | /usr/share/octave/packages/3.2/plot-1.0.8
signal *| 1.0.11 | /usr/share/octave/packages/3.2/signal-1.0.11
specfun *| 1.0.9 | /usr/share/octave/packages/3.2/specfun-1.0.9
splines *| 1.0.7 | /usr/share/octave/packages/3.2/splines-1.0.7
statistics *| 1.0.10 | /usr/share/octave/packages/3.2/statistics-1.0.10
strings *| 1.0.7 | /usr/share/octave/packages/3.2/strings-1.0.7
struct *| 1.0.9 | /usr/share/octave/packages/3.2/struct-1.0.9
symbolic *| 1.0.9 | /usr/share/octave/packages/3.2/symbolic-1.0.9
time *| 1.0.9 | /usr/share/octave/packages/3.2/time-1.0.9
tsa *| 4.1.0 | /usr/share/octave/packages/3.2/tsa-4.1.0
octave:10> help MPI_Init
`MPI_Init' is a function from the file
/usr/lib/octave/packages/3.2/openmpi_ext-1.0.2/x86_64-pc-linux-gnu-api-v37/MPI_Init.oct
-- Loadable Function: INFO = MPI_Init()
Initialize the MPI execution environment
INFO (int) return code
0 MPI_SUCCESS No error
16 MPI_ERR_OTHER Attempt was made to call MPI_Init a
second time
MPI_Init may only be called once in a program
SEE ALSO: MPI_Finalize, MPI_Initialized, MPI_Finalized
Additional help for built-in functions and operators is
available in the on-line version of the manual. Use the command
`doc <topic>' to search the manual index.
Help and information about Octave is also available on the WWW
at http://www.octave.org and via the h...@octave.org
mailing list.
octave:11> help MPI_Send
`MPI_Send' is a function from the file
/usr/lib/octave/packages/3.2/openmpi_ext-1.0.2/x86_64-pc-linux-gnu-api-v37/MPI_Send.oct
-- Loadable Function: INFO = MPI_Send(VALUE,RANKS,TAG,COMM)
MPI_Send sends any octave_value into contiguous memory using
openmpi library even over an heterogeneous cluster i.e 32 bits
CPUs and 64 bits CPU. Returns an integer INFO to indicate success
or failure of octave_value expedition.
VALUE must be an octave variable
RANKS must be a vector containing the list of rank
destination processes
TAG must be an integer to identify the message by openmpi
COMM must be an octave communicator object created by
MPI_Comm_Load function
See also: MPI_Comm_Load, MPI_Init, MPI_Finalize, MPI_Recv
Additional help for built-in functions and operators is
available in the on-line version of the manual. Use the command
`doc <topic>' to search the manual index.
Help and information about Octave is also available on the WWW
at http://www.octave.org and via the h...@octave.org
mailing list.
On Thu, Aug 30, 2012 at 1:04 PM, Sukanta Basu <sukanta.b...@gmail.com> wrote:
> Hi Carlo,
>
> Here is the output:
>
> octave:5> pkg install -verbose openmpi_ext-1.1.0.tar.gz
> mkdir (/tmp/oct-8OOYmQ)
> untar (openmpi_ext-1.1.0.tar.gz, /tmp/oct-8OOYmQ)
> make: Entering directory `/tmp/oct-8OOYmQ/openmpi_ext/src'
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Init.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Initialized.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Comm_rank.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Comm_size.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Finalize.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Finalized.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Send.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Recv.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Iprobe.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Probe.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Barrier.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Comm_Load.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Comm_Test.cc
> mkoctfile -I/usr/lib/openmpi/include
> -I/usr/lib/openmpi/include/openmpi -lpthread -L/usr/lib/openmpi/lib
> -lmpi_cxx -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl
> -lutil -lm -ldl MPI_Get_processor_name.cc
> make: Leaving directory `/tmp/oct-8OOYmQ/openmpi_ext/src'
> copyfile /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Barrier.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Comm_Load.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Comm_Test.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Comm_rank.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Comm_size.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Finalize.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Finalized.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Get_processor_name.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Init.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Initialized.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Iprobe.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Probe.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Recv.oct
> /tmp/oct-8OOYmQ/openmpi_ext/src/MPI_Send.oct
> /tmp/oct-8OOYmQ/openmpi_ext/inst/x86_64-pc-linux-gnu-api-v37
>
> If I use "ver", openmpi_ext shows up without a "*" next to it. I
> believe that signals improper installation.
>
> octave:6> ver
> ----------------------------------------------------------------------
> GNU Octave Version 3.2.4
> GNU Octave License: GNU General Public License
> Operating System: Linux 3.2.0-29-generic #46-Ubuntu SMP Fri Jul 27
> 17:03:23 UTC 2012 x86_64
> ----------------------------------------------------------------------
> Package Name | Version | Installation directory
> -------------------+---------+-----------------------
> benchmark | 1.1.1 | /usr/share/octave/packages/3.2/benchmark-1.1.1
> communications *| 1.0.10 |
> /usr/share/octave/packages/3.2/communications-1.0.10
> control *| 1.0.11 | /usr/share/octave/packages/3.2/control-1.0.11
> data-smoothing *| 1.2.3 |
> /usr/share/octave/packages/3.2/data-smoothing-1.2.3
> econometrics *| 1.0.8 |
> /usr/share/octave/packages/3.2/econometrics-1.0.8
> financial *| 0.3.2 | /usr/share/octave/packages/3.2/financial-0.3.2
> ga *| 0.9.8 | /usr/share/octave/packages/3.2/ga-0.9.8
> general *| 1.2.2 | /usr/share/octave/packages/3.2/general-1.2.2
> gsl *| 1.0.8 | /usr/share/octave/packages/3.2/gsl-1.0.8
> image *| 1.0.14 | /usr/share/octave/packages/3.2/image-1.0.14
> io *| 1.0.14 | /usr/share/octave/packages/3.2/io-1.0.14
> java *| 1.2.8 | /usr/share/octave/packages/3.2/java-1.2.8
> linear-algebra *| 2.1.0 |
> /usr/share/octave/packages/3.2/linear-algebra-2.1.0
> mapping *| 1.0.7 | /usr/share/octave/packages/3.2/mapping-1.0.7
> miscellaneous *| 1.0.11 |
> /usr/share/octave/packages/3.2/miscellaneous-1.0.11
> missing-functions *| 1.0.2 |
> /usr/share/octave/packages/3.2/missing-functions-1.0.2
> nan *| 2.4.4 | /usr/share/octave/packages/3.2/nan-2.4.4
> nnet *| 0.1.13 | /usr/share/octave/packages/3.2/nnet-0.1.13
> octcdf *| 1.0.13 | /usr/share/octave/packages/3.2/octcdf-1.0.13
> octgpr *| 1.2.0 | /usr/share/octave/packages/3.2/octgpr-1.2.0
> odepkg *| 0.6.12 | /usr/share/octave/packages/3.2/odepkg-0.6.12
> openmpi_ext | 1.1.0 |
> /usr/share/octave/packages/3.2/openmpi_ext-1.1.0
> optim *| 1.0.17 | /usr/share/octave/packages/3.2/optim-1.0.17
> optiminterp *| 0.3.3 |
> /usr/share/octave/packages/3.2/optiminterp-0.3.3
> parallel *| 2.0.5 | /usr/share/octave/packages/3.2/parallel-2.0.5
> plot *| 1.0.8 | /usr/share/octave/packages/3.2/plot-1.0.8
> signal *| 1.0.11 | /usr/share/octave/packages/3.2/signal-1.0.11
> specfun *| 1.0.9 | /usr/share/octave/packages/3.2/specfun-1.0.9
> splines *| 1.0.7 | /usr/share/octave/packages/3.2/splines-1.0.7
> statistics *| 1.0.10 |
> /usr/share/octave/packages/3.2/statistics-1.0.10
> strings *| 1.0.7 | /usr/share/octave/packages/3.2/strings-1.0.7
> struct *| 1.0.9 | /usr/share/octave/packages/3.2/struct-1.0.9
> symbolic *| 1.0.9 | /usr/share/octave/packages/3.2/symbolic-1.0.9
> time *| 1.0.9 | /usr/share/octave/packages/3.2/time-1.0.9
> tsa *| 4.1.0 | /usr/share/octave/packages/3.2/tsa-4.1.0
>
> None of the MPI commands are found.
>
> octave:7> help MPI_Init
> error: help: `MPI_Init' not found
> octave:7> help MPI_Send
> error: help: `MPI_Send' not found
>
> Best regards,
> Sukanta
>
> On Thu, Aug 30, 2012 at 12:57 PM, c. <carlo.defa...@gmail.com> wrote:
>> Hi,
>> please keep the list in CC as others may find this discussion useful
>>
>> On 30 Aug 2012, at 18:45, Sukanta Basu wrote:
>>
>>> Hi Carlo,
>>>
>>> I tried to install the new openmpi_ext version.
>> thanks for trying it!
>>
>>> However, it won't compile properly on Octave 3.2.4.
>> I did not knowingly introduce anything that would make this release
>> incompatible with
>> Octave 3.2.4 what exactly is the problem you get in installing?
>> It would be helpful if you could try installing with the "-verbose" option
>> enabled
>>
>> pkg install -verbose openmpi_ext-1.1.0.tar.gz
>>
>> and send me the output
>>
>>> Since Ubuntu 12.04 does not yet have
>>> Octave 3.6 (unofficial version does exist), I could not test it on
>>> 3.6.
>>>
>>> The next release of Ubuntu will happen in October and will include
>>> 3.6.2. I will probably wait for this release.
>> You don't need to wait for a new Ubuntu release to get newer binaries for
>> Ubuntu
>> you could just use one of the links listed here:
>>
>> http://wiki.octave.org/Octave_for_GNU/Linux#Unofficial_binaries
>>
>>> Best regards,
>>> Sukanta
>> c.
>>
>
>
>
> --
> Sukanta Basu
> Associate Professor
> North Carolina State University
> http://www4.ncsu.edu/~sbasu5/
--
Sukanta Basu
Associate Professor
North Carolina State University
http://www4.ncsu.edu/~sbasu5/
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