On Wed, Oct 13, 2010 at 2:39 PM, Noel O'Boyle <baoille...@gmail.com> wrote: > Hi Tim, > > VLD is finding a memory leak under MSVC when using FindAutomorphisms as > follows: > > Call Stack: > c:\program files (x86)\microsoft visual studio > 9.0\vc\include\xmemory (43): std::_Allocate<unsigned int> > c:\program files (x86)\microsoft visual studio > 9.0\vc\include\xmemory (145): std::allocator<unsigned int>::allocate > c:\program files (x86)\microsoft visual studio > 9.0\vc\include\vector (1110): std::vector<unsigned > int,std::allocator<unsigned int> >::_Buy > c:\program files (x86)\microsoft visual studio > 9.0\vc\include\vector (501): std::vector<unsigned > int,std::allocator<unsigned int> >::vector<unsigned > int,std::allocator<unsigned int> > > c:\tools\openbabel\newrepo\src\isomorphism.cpp (571): > OpenBabel::OBAutomorphismQueryAtom::OBAutomorphismQueryAtom > c:\tools\openbabel\newrepo\src\isomorphism.cpp (594): > OpenBabel::CompileAutomorphismQuery > c:\tools\openbabel\newrepo\src\isomorphism.cpp (662): > OpenBabel::FindAutomorphisms > c:\tools\openbabel\newrepo\src\isomorphism.cpp (623): > OpenBabel::FindAutomorphisms > > Could it be that vector<unsigned int> symclasses(_symclass) is > allocated but never deallocated? Don't ask me why?? Some sort of weak > reference keeping it alive?
The vector is never deallocated because the OBAutomorphismQueryAtom objects are deleted using pointers to OBQueryAtom objects. I have added a virtual destructor to OBQueryAtom which means that the OBAuto...Atom default destructor is now called. Tim > I see the same problem in the nightly dynamic analysis > (http://my.cdash.org/viewDynamicAnalysisFile.php?id=280143) : > "256 bytes in 8 blocks are definitely lost in loss record 13 of 32" > > It's not a lot but on a small test file (50 molecules), I have this > same problem 800 times. Any ideas? > > - Noel > ------------------------------------------------------------------------------ Beautiful is writing same markup. Internet Explorer 9 supports standards for HTML5, CSS3, SVG 1.1, ECMAScript5, and DOM L2 & L3. Spend less time writing and rewriting code and more time creating great experiences on the web. Be a part of the beta today. http://p.sf.net/sfu/beautyoftheweb _______________________________________________ OpenBabel-Devel mailing list OpenBabel-Devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-devel
