Hi
quite a few Debian architectures have failing tests for openbabel-2.3.0,
namely arm, ia64, powerpc and s/390 (as well as the i386/amd64 ports of
kFreeBSD). For a summary, see here:
https://buildd.debian.org/status/package.php?p=openbabel
These are the failing tests, if somebody is interested:
arm:
====
54/60 Test #54: pytest_sym .......................***Timeout 1500.06 sec
[...]
98% tests passed, 1 tests failed out of 60
arm is one of the slower arches, some other tests (canonstable, builder,
some forcefield tests) took more than 100 seconds, and this test took
787 seconds on powerpc, see below. Maybe the timeout should be
adjusted for this one, if possible.
The Debian autobuilders usually wait three hours for output, and kill
off the build then.
ia64:
=====
11/60 Test #11: rotor_Test .......................***Failed Error
regular expression found in output. Regex=[FAIL] 0.08 sec
/build/buildd-openbabel_2.3.0+dfsg-1-ia64-rYAJql/openbabel-2.3.0+dfsg/test/rotortest.cpp:123:
IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 180.0,
1.0) (FAIL)
98% tests passed, 1 tests failed out of 60
powerpc:
========
11/60 Test #11: rotor_Test .......................***Failed Error
regular expression found in output. Regex=[FAIL] 0.07 sec
/build/buildd-openbabel_2.3.0+dfsg-1-powerpc-ApYGHy/openbabel-2.3.0+dfsg/test/rotortest.cpp:123:
IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 180.0,
1.0) (FAIL)
[...]
54/60 Test #54: pytest_sym .......................***Failed Error
regular expression found in output. Regex=[FAIL]787.74 sec
...FF...F...F....FF...
======================================================================
FAIL: testSMILEStoInChI (__main__.TestConversions)
----------------------------------------------------------------------
Traceback (most recent call last):
File
"/build/buildd-openbabel_2.3.0+dfsg-1-powerpc-ApYGHy/openbabel-2.3.0+dfsg/test/testsym.py",
line 165, in testSMILEStoInChI
self.assertEqual(output.rstrip(), can)
AssertionError: '' != 'FC=CCl'
[...]
97% tests passed, 2 tests failed out of 60
s/390:
=====
54/60 Test #54: pytest_sym .......................***Failed Error
regular expression found in output. Regex=[FAIL]274.06 sec
...FF...F...F....FF...
======================================================================
FAIL: testSMILEStoInChI (__main__.TestConversions)
----------------------------------------------------------------------
Traceback (most recent call last):
File
"/build/buildd-openbabel_2.3.0+dfsg-1-s390-I5nJss/openbabel-2.3.0+dfsg/test/testsym.py",
line 165, in testSMILEStoInChI
self.assertEqual(output.rstrip(), can)
AssertionError: '' != 'FC=CCl'
[...]
98% tests passed, 1 tests failed out of 60
kfreebsd (amd64):
=================
28/60 Test #28: charge-mmff94_Test ...............***Failed 0.00 sec
# Testing MMFF94 Charge Model...
Bail out! Cannot load charge model!
[...]
Start 29: charge-gasteiger_Test
29/60 Test #29: charge-gasteiger_Test ............***Failed 0.00 sec
# Testing GASTEIGER Charge Model...
Bail out! Cannot load charge model!
[...]
58/60 Test #58: pybindtest_bindings ..............***Failed Error
regular expression found in output. Regex=[FAIL] 0.00 sec
.F
======================================================================
FAIL: testSimple (__main__.TestPythonBindings)
----------------------------------------------------------------------
Traceback (most recent call last):
File
"/build/buildd-openbabel_2.3.0+dfsg-1-kfreebsd-amd64-FIHx9h/openbabel-2.3.0+dfsg/test/testbindings.py",
line 62, in testSimple
self.assertAlmostEqual(mol.GetMolWt(), 78.5, 1)
AssertionError: 0.0 != 78.5 within 1 places
[...]
59/60 Test #59: pybindtest__pybel ................***Failed Error
regular expression found in output. Regex=[FAIL] 0.00 sec
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
======================================================================
ERROR: testAattributes (testpybel.TestOBPybelNoDraw)
Get the values of some properties
----------------------------------------------------------------------
Traceback (most recent call last):
File
"/build/buildd-openbabel_2.3.0+dfsg-1-kfreebsd-amd64-FIHx9h/openbabel-2.3.0+dfsg/test/../scripts/python/examples/testpybel.py",
line 65, in setUp
self.mols = [self.toolkit.readstring("smi", "CCCC"),
File "../scripts/pybel.py", line 119, in readstring
raise ValueError("%s is not a recognised OpenBabel format" % format)
ValueError: smi is not a recognised OpenBabel format
[...]
0/60 Test #60: pybindtest_example ...............***Failed Error
regular expression found in output. Regex=[FAIL] 0.00 sec
.E
======================================================================
ERROR: testNumberOfAtoms (__main__.ExamplePybelTest)
----------------------------------------------------------------------
Traceback (most recent call last):
File
"/build/buildd-openbabel_2.3.0+dfsg-1-kfreebsd-amd64-FIHx9h/openbabel-2.3.0+dfsg/test/testexample.py",
line 19, in testNumberOfAtoms
mol = pybel.readstring("smi", "C(=O)Cl")
File "../scripts/pybel.py", line 119, in readstring
raise ValueError("%s is not a recognised OpenBabel format" % format)
ValueError: smi is not a recognised OpenBabel format
[...]
92% tests passed, 5 tests failed out of 60
kfreebsd (i386):
================
Has the same failures as kfreebsd (amd64), plus this weird one:
44/60 Test #44: math_Test ........................***Failed Error
regular expression found in output. Regex=[not ok] 1.00 sec
# math: repeating each test 1000 times
# math: entering testBasics_vector3
ok 1
ok 2
[...]
ok 72645
not ok 72646 - In testEigenvalues(), in line 332, in file
/build/buildd-openbabel_2.3.0+dfsg-1-kfreebsd-i386-VtKcJj/openbabel-2.3.0+dfsg/test/math.cpp:
expression ( eigenvals[0] < eigenvals[1] && eigenvals[1] < eigenvals[2]
) is false.
ok 72647
[...]
ok 86000
# math: passed testEigenvectors
1..86000
# math: 1 out of 86000 tests failed.
Michael
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