Bugs item #3537811, was opened at 2012-06-25 07:59 Message generated for change (Tracker Item Submitted) made by igor_filippov You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=428740&aid=3537811&group_id=40728
Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Library Functions Group: 2.3.x Status: Open Resolution: None Priority: 5 Private: No Submitted By: Igor (igor_filippov) Assigned to: Nobody/Anonymous (nobody) Summary: double free in rxnformat.cpp/obconversion.cpp Initial Comment: When RXN format output is created from from OBReaction there is a segfault in line 261 in obconversion.cpp: if(pInStream && NeedToFreeInStream) { delete pInStream; <<<<<<<< here pInStream=NULL; NeedToFreeInStream = false; } I think this has something to do with the following portion of rxnformat.cpp: OBConversion MolConv(*pConv); //new copy to use to write associated MOL MolConv.AddOption("no$$$$",OBConversion::OUTOPTIONS); MolConv.SetAuxConv(NULL); //temporary until a proper OBConversion My suspicion is that pInStream is getting deleted twice - through the original OBConversion object and through the MolConv copy. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=428740&aid=3537811&group_id=40728 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ OpenBabel-Devel mailing list OpenBabel-Devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-devel