Bugs item #3550987, was opened at 2012-07-28 12:11 Message generated for change (Tracker Item Submitted) made by do0gie You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=428740&aid=3550987&group_id=40728
Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Installation/Building Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: David Nunn (do0gie) Assigned to: Nobody/Anonymous (nobody) Summary: Problems building perl bindings MacOSX 10.8 Initial Comment: Just upgraded to MacOSX 10.8, and am trying to recompile OpenBabel with Perl Bindings. XCode cmdline tools, cmake, perl 5.12.4, eigen, swig, swig-perl, etc are all up to date. %svn co https://openbabel.svn.sourceforge.net/svnrootopenbabel/openbabel openbabel %cd ../build/openbabel %/opt/local/bin/cmake \ -DRUN_SWIG=ON \ -DPYTHON_BINDINGS=ON \ -DPERL_BINDINGS=ON \ -DPERL_LIBRARY=/System/Library/Perl/5.12/darwin-thread-multi-2level/CORE/libperl.dylib \ -DPERL_INCLUDE_PATH=/System//Library/Perl/5.12/darwin-thread-multi-2level/CORE \ -DJAVA_BINDINGS=ON \ -DEIGEN3_INCLUDE_DIR=/opt/local/include/eigen3 \ ../../src/openbabel/openbabel/trunk/ % make % make test % sudo make install % setenv PERL5LIB "/usr/local/lib:~/lib" % perl -de 1 <1> use OpenBabel; Can't find 'boot_Chemistry__OpenBabel' symbol in /usr/local/lib/libOpenBabel.dylib at /usr/local/lib/OpenBabel.pm line 11 Compilation failed in require at (eval 6)[/System/Library/Perl/5.12/perl5db.pl:638] line 2. at (eval 6)[/System/Library/Perl/5.12/perl5db.pl:638] line 2 The terminal stream from the commands is attached. cmake complained about wxWidgets (macports for this is broken, but I don't care about the GUI), conio.h and xdr.h, though the latter is present in the source tree, and SCANDIR_NEEDS_CONST test failed (not sure what that is). make proceeded with just warnings. make test passed all except pybindtest_bindings and pybindtest_example, but OpenBabel.pm fails when used in perl. I don't quite understand what went wrong. Anyone else have success building on MacOSX 10.8 ? Any help greatly appreciated. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=428740&aid=3550987&group_id=40728 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ OpenBabel-Devel mailing list OpenBabel-Devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-devel
