Everyone,
I have a question concerning using openbabel to convert a fasta file to
another file type. In particular, I want to know which file under the
current release (2.4.1) is responsible for doing translation. I thought
that the file responsible for this was under
openbabel-2.4.1/src/formats/fastaformat.cpp however despite any
modifications I make, it doesn't seem to reflected when running "babel" or
"obabel" to do the conversion. For instance, I went as far as to include
kill signals in the code itself to see if it was even running along with
trying to output to the terminal. Doing this had no effect on running
"obabel" or "babel" even though I was using fasta format as the input
format (i.e. ./babel -ifa a.fa -opdb a.pdb) after recompiling. I ask
because I want to change the behavior of how fasta interprets strings (for
instance, making it sensitive to case).
Could anyone provide me some wisdom in locating the file that is actually
responsible for doing the conversion in fasta? I can't seem to find it.
Thanks!
Joshua
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