This should be fixed now in the latest revision.
On 26 July 2010 10:29, Noel O'Boyle <baoille...@gmail.com> wrote:
> We need to add a conditional compile for Eigen2.
>
> In the meanwhile, either compile with Eigen2
> (-DEIGEN2_INCLUDE_DIR=path_to_eigen2) or else revert
> openbabel-python.i back to the revision of two weeks ago (use "svn
> log" on the file, and then "svn update -r NNNN openbabel-python.i".
>
> - Noel
>
> On 23 July 2010 22:45, TJ O'Donnell <t...@acm.org> wrote:
>> I've got openbabel and the python stuff built fine using the latest
>> subversion source.
>> But I'm getting an error importing openbabel.
>>
>> Python 2.6.5 (r265:79063, Apr 16 2010, 13:09:56)
>> [GCC 4.4.3] on linux2
>> Type "help", "copyright", "credits" or "license" for more information.
>> >>> import openbabel
>> Traceback (most recent call last):
>> File "<stdin>", line 1, in <module>
>> File "/usr/local/lib/python2.6/dist-packages/openbabel.py", line 42, in
>> <module>
>> _openbabel = swig_import_helper()
>> File "/usr/local/lib/python2.6/dist-packages/openbabel.py", line 38, in
>> swig_import_helper
>> _mod = imp.load_module('_openbabel', fp, pathname, description)
>> ImportError: /usr/local/lib/python2.6/dist-packages/_openbabel.so: undefined
>> symbol: _ZTVN9OpenBabel22OBEnergyConformerScoreE
>> >>>
>>
>> Any ideas on what might be going wrong?
>> Do I need to get LD_LIBRARY_PATH set right? I have it as
>> export
>> LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:/usr/local/lib/:/usr/local/lib/openbabel/2.2.99/
>> This is where the .so's from my current build were installed
>>
>> Thanks,
>> TJ
>>
>> On 7/23/2010 12:00 PM, Tim Vandermeersch wrote:
>>> On Fri, Jul 23, 2010 at 8:56 PM, TJ O'Donnell<t...@acm.org> wrote:
>>>> I've successfully compiled the cpp code and built the .so's using
>>>> the current subversion source, but ran into a problem making the
>>>> python bindings. The error (python setup.py build in
>>>> openbabel/scripts/python)
>>>> is that openbabel.py is missing. I see openbabel-python.i in
>>>> openbabel/scripts. Is that for swig? Do I need to run swig to
>>>> create openbabel.py? Can someone tell me how to do that?
>>>
>>> Using cmake, make sure these variables are set to ON in CMakeCache.txt
>>> (in your build dir):
>>>
>>> ENABLE_PYTHON
>>> RUN_SWIG
>>>
>>> $ cd openbabel
>>> $mkdir build
>>> $ cd build
>>> $ cmake -DENABLE_PYTHON:=ON -DRUN_SWIG:=ON ..
>>> $ make
>>>
>>> This will build the python bindings.
>>>
>>> Tim
>>>
>>>> Thanks,
>>>> TJ
>>>>
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