Which is the cmake configure file? I ran the following cmake command
cmake -DCMAKE_INSTALL_PREFIX=/usr/local/openbabel -DPYTHON_BINDINGS=ON ~/src/openbabel and the output of make -j 4 is at https://gist.github.com/961340 It looks like the error is due to some issue with the OB dylib generation On Sat, May 7, 2011 at 6:36 AM, Noel O'Boyle <baoille...@gmail.com> wrote: > Can you show the cmake configure you used? (Did you compile the Python > bindings? You might be trying to use old bindings against new shared > libraries.) > > - Noel > > On 6 May 2011 23:48, Rajarshi Guha <rajarshi.g...@gmail.com> wrote: >> Hi, I just updated my OB repo to the latest SVN. When I did: >> >> make clean >> make -j 3 >> make install >> >> and then tried the openbabel module in Python (OS X 10.6) I get the >> following error: >> >> [GCC 4.0.1 (Apple Inc. build 5465)] on darwin >> Type "help", "copyright", "credits" or "license" for more information. >>>>> import openbabel as ob >> Traceback (most recent call last): >> File "<stdin>", line 1, in <module> >> File "/Library/Python/2.5/site-packages/openbabel.py", line 38, in <module> >> import _openbabel >> ImportError: dlopen(/Library/Python/2.5/site-packages/_openbabel.so, >> 2): Symbol not found: __ZN9OpenBabel10OBUnitCell13GetCellMatrixEv >> Referenced from: /Library/Python/2.5/site-packages/_openbabel.so >> Expected in: /usr/local/openbabel/lib/libopenbabel.4.dylib >> >> >> Has anybody seen this before? >> >> -- >> Rajarshi Guha >> NIH Chemical Genomics Center >> >> ------------------------------------------------------------------------------ >> WhatsUp Gold - Download Free Network Management Software >> The most intuitive, comprehensive, and cost-effective network >> management toolset available today. Delivers lowest initial >> acquisition cost and overall TCO of any competing solution. >> http://p.sf.net/sfu/whatsupgold-sd >> _______________________________________________ >> OpenBabel-discuss mailing list >> OpenBabel-discuss@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/openbabel-discuss >> > -- Rajarshi Guha NIH Chemical Genomics Center ------------------------------------------------------------------------------ WhatsUp Gold - Download Free Network Management Software The most intuitive, comprehensive, and cost-effective network management toolset available today. Delivers lowest initial acquisition cost and overall TCO of any competing solution. http://p.sf.net/sfu/whatsupgold-sd _______________________________________________ OpenBabel-discuss mailing list OpenBabel-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
