> Using revision 4513 I have no luck getting a .jar file generated. I executed
> the following commands in /Users/mkj/openbabel/build on Mac OS X 10.6.7:
>>
>> cmake ../trunk -DCMAKE_INSTALL_PREFIX=/Users/mkj/openbabel/install
>> -DEIGEN2_INCLUDE_DIR=/Users/mkj/Downloads/eigen-eigen-0938af7840b0 -
>>
>> DRUN_SWIG=ON -DSWIG_EXECUTABLE=/Users/mkj/openbabel/swig/bin/swig
>>
>>  make -j 2
>
>
>  This completes successfully, but there is no .jar files in openbabel/trunk
> or openbabel/build. I then tried adding the following:
>>
>> -DJAVA_BINDINGS=ON
>
> This results in the following error:
>>>
>>> [ 99%] Built target test_unitcell
>>>
>>> [ 99%] Generating
>>> /Users/mkj/openbabel/trunk/scripts/java/openbabel-java.cpp
>>>
>>> /Users/mkj/openbabel/trunk/include/openbabel/isomorphism.h:159: Warning
>>> 325: Nested class not currently supported (Functor ignored)
>>>
>>> javac: file not found: org/openbabel/*.java
>>>
>>> Usage: javac <options> <source files>
>>>
>>> use -help for a list of possible options
>>>

I spent a little while trying to fix this but was unable to do so.
It's something weird with CMake. The workaround is to rerun make for
the bindings, e.g. with "make bindings_java". It should work the
second time.

If OBConformerSearch is not found, it's likely that Eigen2 was not
found. See the install instructions and look at the output of running
CMake.

- Noel

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