Done.
1) I purged any previous version of python-babel (either manually
installed or via apt-get).
2) I added the local python libraries folder to LD_LIBRARY_PATH (I had
previously added the local OpenBabel path)
3) I modified all the relevant lines at CMakeCache.txt in the build
directory.
4) Then "touch openbabel-python.i" and, just in case, "touch
scripts/openbabel-python.i"
5) I recompiled and reinstalled and it seems that now it is using the
local installation.
6) Yet:
Python 2.7.2 (default, Sep 15 2011, 12:37:05)
[GCC 4.4.5] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> import openbabel
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/mirix/python/lib/python2.7/site-packages/openbabel.py",
line 212, in <module>
_openbabel = swig_import_helper()
File "/home/mirix/python/lib/python2.7/site-packages/openbabel.py",
line 208, in swig_import_helper
_mod = imp.load_module('_openbabel', fp, pathname, description)
ImportError: dynamic module does not define init function (init_openbabel)
>>>
On 09/15/2011 12:16 PM, Noel O'Boyle wrote:
> One Python is 2.6, the other is 2.7. You need to decide which you want
> to use as you can't compile against 2.7 and then use the 2.6 one. Can
> you check all Python related variables in CMakeCache to see whether
> they point to the version you want to use (and then "touch
> openbabel-python.i" and recompile)?
>
> - Noel
>
> On 15 September 2011 11:05, Miro Moman<[email protected]> wrote:
>> Debian 6.0.2 64-bit.
>>
>> Yes, I have OpenBabel installed globally using apt-get because there are
>> several packages that depend on it. I also have it locally. PYTHONPATH now
>> points to the locally installed version, but I was getting the same error
>> before defining the environmental variable PYTHONPATH. In fact, I performed
>> a local install because I was having problems with the global one. The
>> program is running fine (both versions). The only problem appears to be the
>> Python bindings.
>>
>> The local installation:
>>
>> mirix@aeolux:~/openbabel/bin$ ../../python/bin/python2.7
>> Python 2.7.2 (default, Sep 14 2011, 12:28:39)
>> [GCC 4.4.5] on linux2
>> Type "help", "copyright", "credits" or "license" for more information.
>>>>> import openbabel
>> Traceback (most recent call last):
>> File "<stdin>", line 1, in<module>
>> File "/home/mirix/python/lib/python2.7/site-packages/openbabel.py", line
>> 170, in<module>
>> _openbabel = swig_import_helper()
>> File "/home/mirix/python/lib/python2.7/site-packages/openbabel.py", line
>> 166, in swig_import_helper
>> _mod = imp.load_module('_openbabel', fp, pathname, description)
>> ImportError: dynamic module does not define init function (init_openbabel)
>> [2]+ Stopped ../../python/bin/python2.7
>>
>> The global installation
>>
>> mirix@aeolux:~/openbabel/bin$ python
>> Python 2.6.6 (r266:84292, Dec 26 2010, 22:31:48)
>> [GCC 4.4.5] on linux2
>> Type "help", "copyright", "credits" or "license" for more information.
>>>>> import openbabel
>> Traceback (most recent call last):
>> File "<stdin>", line 1, in<module>
>> File "/home/mirix/python/lib/python2.7/site-packages/openbabel.py", line
>> 170, in<module>
>> _openbabel = swig_import_helper()
>> File "/home/mirix/python/lib/python2.7/site-packages/openbabel.py", line
>> 166, in swig_import_helper
>> _mod = imp.load_module('_openbabel', fp, pathname, description)
>> ImportError: dynamic module does not define init function (init_openbabel)
>> [3]+ Stopped python
>>
>>
>>
>>
>> On 09/15/2011 11:55 AM, Noel O'Boyle wrote:
>>> On 15 September 2011 10:37, Miro Moman<[email protected]> wrote:
>>>> So, I do not understand what is wrong. Is this a bug?
>>> What operating system? Do you have other versions of Open Babel
>>> installed. Also, what is the result of testing the installation as
>>> described in the install instructions:
>>>
>>> http://openbabel.org/docs/current/UseTheLibrary/PythonInstall.html#test-the-installation
>>>
>>> - Noel
>>
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