First of - congratulations on the paper! This gives us a way to give OB developers their due by citing the publication.
I have found a few examples of Substances from Pubchem where OB 2.3.0 gives segfault - my guess is due to the presence of a dummy atom - e.g. 6361218 -OEChem-04171109372D 2 0 0 0 0 0 0 0 0999 V2000 -1.1666 0.0418 0.0000 * 0 3 0 0 0 0 0 0 0 0 0 0 0.3726 0.0929 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 A 1 R M CHG 1 1 1 M END This particular molecule is SID 16361218. While those are not real "molecules" the segfaults are quite unpleasant, especially if it's one structure out of a big file of otherwise good molecules. Has this been fixed already in the svn somewhere? I can share a set of 5398 such structures from Pubchem substances. Would it be possible to get the segfaults out of the way before 2.3.1 release? Best regards, Igor ------------------------------------------------------------------------------ All the data continuously generated in your IT infrastructure contains a definitive record of customers, application performance, security threats, fraudulent activity and more. Splunk takes this data and makes sense of it. Business sense. IT sense. Common sense. http://p.sf.net/sfu/splunk-d2d-oct _______________________________________________ OpenBabel-discuss mailing list OpenBabel-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-discuss