That should be "make[SPACE]_openbabel" :-) On 13 October 2011 15:31, Chris Mayne <cgma...@gmail.com> wrote: > Thanks for not giving up on me! > I figured out the version problem -- it was installing into > /usr/local/bin/bin instead of /usr/local/bin > > The requested information: > > $ touch ../../src/openbabel/scripts/openbabel-python.i > $ VERBOSE=1 make_openbabel >& tmp.txt > $ cat tmp.txt > -bash: make_openbabel: command not found > > $ grep -i python CMakeCache.txt > tmp2.txt > $ cat tmp2.txt > //Build Python bindings > PYTHON_BINDINGS:BOOL=ON > PYTHON_EXECUTABLE:FILEPATH=/usr/bin/python2.6 > PYTHON_INCLUDE_DIR:PATH=/System/Library/Frameworks/Python.framework/Headers > PYTHON_LIBRARY:FILEPATH=/usr/lib/libpython2.6.dylib > //Details about finding PythonInterp > FIND_PACKAGE_MESSAGE_DETAILS_PythonInterp:INTERNAL=[/usr/bin/python2.6][v()] > //Details about finding PythonLibs > FIND_PACKAGE_MESSAGE_DETAILS_PythonLibs:INTERNAL=[/usr/lib/libpython2.6.dylib][/System/Library/Frameworks/Python.framework/Headers][v()] > //ADVANCED property for variable: PYTHON_EXECUTABLE > PYTHON_EXECUTABLE-ADVANCED:INTERNAL=1 > //ADVANCED property for variable: PYTHON_INCLUDE_DIR > PYTHON_INCLUDE_DIR-ADVANCED:INTERNAL=1 > //Path to where Python.h is found (deprecated) > PYTHON_INCLUDE_PATH:INTERNAL=/System/Library/Frameworks/Python.framework/Headers > //ADVANCED property for variable: PYTHON_LIBRARY > PYTHON_LIBRARY-ADVANCED:INTERNAL=1 > > > > > On Thu, Oct 13, 2011 at 7:34 AM, Noel O'Boyle <baoille...@gmail.com> wrote: >> >> On 12 October 2011 15:47, Chris Mayne <cgma...@gmail.com> wrote: >> > I cleared everything out and reran cmake with the following flags (i.e. >> > leaving the -DPYTHON_PATH out): >> > >> > $ cmake -DCMAKE_INSTALL_PREFIX=/usr/local/bin ../../src/openbabel >> > -DPYTHON_BINDINGS=ON -DRUN_SWIG=ON -DSWIG_EXECUTABLE=/usr/local/bin/swig >> > -DEIGEN2_INCLUDE_DIR=/usr/local/include/eigen2 >> > -DEIGEN3_INCLUDE_DIR=/usr/local/include/eigen3 >> > >> > the only warning was: >> > >> > CMake Warning: >> > Manually-specified variables were not used by the project: >> > >> > EIGEN2_INCLUDE_DIR >> > >> > I then issued "make" which yielded these warnings: >> > >> > ld: warning: directory >> > '/Users/cmayne/openbabel/src/openbabel/scripts/python/../../lib' >> > following >> > -L not found >> > ld: warning: directory >> > '/Users/cmayne/openbabel/src/openbabel/scripts/python/../../lib64' >> > following >> > -L not found >> > ld: warning: in ../lib/libopenbabel.dylib, file was built for >> > unsupported >> > file format which is not the architecture being linked (i386) >> > ld: warning: directory >> > '/Users/cmayne/openbabel/src/openbabel/scripts/python/../../lib' >> > following >> > -L not found >> > ld: warning: directory >> > '/Users/cmayne/openbabel/src/openbabel/scripts/python/../../lib64' >> > following >> > -L not found >> > ld: warning: in ../lib/libopenbabel.dylib, file was built for >> > unsupported >> > file format which is not the architecture being linked (ppc) >> > ld: warning: directory >> > '/Users/cmayne/openbabel/src/openbabel/scripts/python/../../lib' >> > following >> > -L not found >> > ld: warning: directory >> > '/Users/cmayne/openbabel/src/openbabel/scripts/python/../../lib64' >> > following >> > -L not found >> > [100%] Built target _openbabel >> > >> > >> > It would seem that this is where the python problems are coming up. >> >> Ok. Let's get to the bottom of this. Try "touch >> ../../src/openbabel/scripts/openbabel-python.i" and then "VERBOSE=1 >> make _openbabel >& tmp.txt". This will give us the command lines that >> are causing the problem. Also, it would be good to know which Python >> are you linking against. Try "grep -i python CMakeCache.txt > >> tmp2.txt". >> >> - Noel > >
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