I'm unfamiliar with what's going on with the echo %PATH%, so there's not
much for me to think about. It displays a variety of file strings, the last
of which is C:\Program
Files (x86)\OpenBabel-2.3.2.
The GUI is working fine, and I'm running windows 7.
So am I just out of luck on being able to use pybel on this computer?
On Thu, Jun 6, 2013 at 12:59 PM, Noel O'Boyle <baoille...@gmail.com> wrote:
> Hmmm. Then it should be working.
>
> If you've installed a 32-bit Python 2.7, then it should just work if
> the first openbabel-2.dll found on the PATH is the one in C:\Program
> Files (x86)\OpenBabel-2.3.2. Open a command-window and type "echo
> %PATH%" and have a think about this.
>
> And you're sure that the GUI, for example, is working fine? E.g. try a
> SMILES to MOL file conversion.
>
> I'm out of ideas. It must be something specific to your machine. One
> second, this isn't a Windows 8 machine by any chance? If so, all bets
> are off.
>
> - Noel
>
> On 6 June 2013 20:39, Matt Berlin <mgber...@gmail.com> wrote:
> > openbabel-python-1.8.py27.exe
> > OpenBabel2.3.2a_Windows_Installer.exe
> >
> >
> > On Thu, Jun 6, 2013 at 12:36 PM, Noel O'Boyle <baoille...@gmail.com>
> wrote:
> >>
> >> (Please cc the list)
> >>
> >> Ok. That's that ruled out.
> >>
> >> The next possibility is that you've installed incompabible versions of
> >> the GUI, and the Python bindings. What versions exactly were these?
> >> That is, what was the name of the installer?
> >>
> >> - Noel
> >>
> >> On 6 June 2013 20:11, Matt Berlin <mgber...@gmail.com> wrote:
> >> > Yeah, I'm pretty sure I am. I'm very new to this.
> >> >
> >> >>>> import sys
> >> >>>> sys.maxsize
> >> > 2147483647
> >> >>>> print("%x" % sys.maxsize, sys.maxsize > 2**32)
> >> > ('7fffffff', False)
> >> >
> >> > I had to use the 32 bit version in order to get the bindings to
> install.
> >> >
> >> > --Matt.
> >> >
> >> >
> >> > On Thu, Jun 6, 2013 at 11:52 AM, Noel O'Boyle <baoille...@gmail.com>
> >> > wrote:
> >> >>
> >> >> Are you using 32-bit Python?
> >> >>
> >> >> On 6 June 2013 19:20, Matt Berlin <mgber...@gmail.com> wrote:
> >> >> > Hello,
> >> >> > After installing the OpenBabelGui as well as the bindings for
> version
> >> >> > 2.7,
> >> >> > when I run
> >> >> >
> >> >> >>>> import pybel
> >> >> >>>> mol = pybel.readstring("smi", "CC(=O)Br")
> >> >> >
> >> >> > I receive the error:
> >> >> >
> >> >> > Traceback (most recent call last):
> >> >> > File "<stdin>", line 1, in <module>
> >> >> > File "C:\Python27\lib\site-packages\pybel.py", line 17
> >> >> > raise ValueError("%s is not a recognised Open Babel
> >> >> > ValueError: smi is not a recognised Open Babel format
> >> >> >
> >> >> > If I type obabel -H smi it recognizes the format.
> >> >> >
> >> >> >
> >> >> > I've uninstalled a reinstalled the GUI as well as the bindings
> >> >> > multiple
> >> >> > times, with reboots in between. Any idea why this isn't working?
> >> >> >
> >> >> > Thanks,
> >> >> > Matt
> >> >> >
> >> >> >
> >> >> >
> >> >> >
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> >> >> > _______________________________________________
> >> >> > OpenBabel-discuss mailing list
> >> >> > OpenBabel-discuss@lists.sourceforge.net
> >> >> > https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
> >> >> >
> >> >
> >> >
> >
> >
>
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