Hi,
I'm not sure about the command line tools, but you can get the python 
libraries for chemfp 1.1 pre-built for windows here: (use control-F to 
search for chemfp)

http://www.lfd.uci.edu/~gohlke/pythonlibs/

I can confirm that they work on windows sometime in the last year.


As an aside, thank you Andrew for building chemfp, I have found it to be 
very useful (not to mention fast!).

Matt

On 10/22/2015 09:29 AM, Andrew Dalke wrote:
> On Oct 21, 2015, at 10:36 PM, Matthew Baumgartner wrote:
>> Check out chemfp. It can do efficient all-by-all similarity calculations.
>> http://chemfp.com/
> Thanks for pointing out my software.
>
> As a point of concern, I haven't tested chemfp under MS Windows.
> I haven't even compiled it on the platform in years.
>
> So while it *might* work, there's no promises.
>
> (It gets works with version 2.0, which is the for-pay version. I've
> changed some "int" values to "long" to support > 4GB of fingerprint
> data, and forgot that on the MS-based platforms a "long" is 32 bits.)
>
> Cheers,
>
>                               Andrew
>                               da...@dalkescientific.com
>
>
>
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