Hi,
I am trying to align 2 molecules with obfit based on a pharmacaphore. I am
running it as:
obfit 'c2c(-[#7]-[#6](-c1cccnc1)=[#8])scn2' reference.sd moving.sd > aligned.sd
When I use obabel to convert from .sd to .png this is the ouput:
[cid:e20d815f-f6f0-443b-afe9-aa7201cfc086]
Am I incorrectly running obfit, or am I misinterpreting what obfit does? Thanks
for any help!
Cheers,
John
Cheers,
John
***********************************
John Bruning, Post-Doctoral Scholar
Stanford University, Glenn Lab
CCSR Building, #3110
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