> My second question is regarding running python programs in command line, > have you ever tried to run the python program that imports pybel from inside > a batch file? For me this throws an error "ModuleNotFoundError: No module > named pybel".
One way or another, the environment is different. While you mention including the Pybel and openbabel.py files in the site-packages directory, my guess is that they're not being loaded somehow. Since there aren't a whole lot of Windows users on here, I'm afraid we can't be much help. But you're doing the right thing - checking that things run from the command-line first. Somehow, the environment of the batch file is different than the command-line. -Geoff _______________________________________________ OpenBabel-discuss mailing list OpenBabel-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-discuss