in our test system I used the "Rebuild OpenSSL database and next serial
number" function to recreate the index.txt file.

After this was successfully performed, I noticed that the revocation date
in index.txt was destroyed, leading to errorneous CRLs:

Revoked Certificates:
    Serial Number: 03
        Revocation Date: Dec 31 23:59:59 1999 GMT
    Serial Number: 04
        Revocation Date: Dec 31 23:59:59 1999 GMT
    Serial Number: 05
        Revocation Date: Dec 31 23:59:59 1999 GMT
[...]

Bug or misconfiguration?

I think a similar bug was reported some weeks ago...have a look at the archives....

Oliver


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