Hi Hugh,

The Exclusion archetype makes sense at a diagnosis or procedure level
but does not work well for detailed clinical findings.  In the case of
the pathology archetypes it would result in the creation of scores of
Exclusion archetypes and umanageable templates.

The problem Koray raises is actually quite complex and difficult.

1. There is crossover with the more generic problem of questionnaire
type constructs which run counter to Clinical Statement type
expressions
e.g.

(Name) 'Polyps present" =Y/N (value)

 as opposed to
(Name) 'Polyp findings'  = Polyps present/ polyps absent (value)

2. The handling of indeterminate/equivocal responses which is handled
specifically in Snomed and by possibly by Null flavours in
HL7/openEHR, though this can be difficult to acheive reliably e.g Some
path models have both indeterminate AND equivocal. Others have more
nuanced values etc. My policy when constructing the path archetypes
was to model 'nulls' explicitly as Koray has done. This is frustrating
and cumbersome but does make Snomed mapping much easier.


3. Koray is also identifying a need for a conditional statement which
effectively switches on /off mandation for child elements. I
understand Graham's point that this requirement is often pretty
apparent from the model but it is an other aspect of domain clinical
knowledge which should be captured, even if the condiitonal expression
is too complex for a computable formalism and is expressed textually.


4. There is a related problem that I have identified from working with
detailed findings. Quite often the initial requirement is just for a
simple Present/Absent or Normal/Abnormal element e.g Polyps Y/N.
However from experience we know that there is a strong possibility
that this simple requirement is likely to expand to require a Cluster
with far more detail. We are faced with a dilemma as whether we model
as a simple element , which keeps the current expression clean and
simple, or whether we immediately use a cluster which adds some (for
now) unnecessary complexity.

When thinking about this , it struck me that there may be a place for
specifically supporting the detailed clinical finding to allow more
natural expansion of the content without disturbing subsequent
archetype paths. Furthermore, this seemed also to have relevance to
work on aligning with Snomed post-coordination. I wish I could have
claimed to have solved the problem but so far all that has emerged are
pages of scribbled notes.

My suggestion is that the 'Detailed Clinical finding' i.e. sub-Entry
is a challenge which perhaps needs some fresh thinking, perhaps in
combination with Snomed post-coordination work and  addressing the
Questionnaire conundrum.

Ian



Dr Ian McNicoll
office / fax? +44(0)1536 414994
mobile +44 (0)775 209 7859
skype ianmcnicoll
ian.mcnicoll at oceaninformatics.com


Clinical analyst,?Ocean Informatics
openEHR Clinical Knowledge Editor www.openehr.org/knowledge
Honorary Senior Research Associate, CHIME, UCL
BCS Primary Health Care SG Group www.phcsg.org




On 15 December 2010 11:40, Hugh Leslie <hugh.leslie at oceaninformatics.com> 
wrote:
> Hi Koray
>
> One way that we are handling this kind of issue is with a separate exclusion
> archetype.? So for adverse reactions for instance, if you want to say that
> this person has no known allergies, you use a separate archetype called an
> exclusion archetype.? For data, this has the advantage of enabling an easy
> query for "no allergies" rather than pulling up an adverse reaction instance
> and having to look inside it for "no allergies".?? This works for many
> different types of content and means that you don't have to hack archetypes
> to try to add the negative.? So in your use case, you could have a specific
> "No polyps" exclusion archetype which models the location.
>
> This is a common clinical pattern and problem.
>
> regards Hugh
>
> On 14/12/2010 9:44 PM, Koray Atalag wrote:
>
> Hi Tom, here is our response:
>
>
>
> We have so far came across two issues which we believe should be handled at
> the clinical modelling levels (i.e. RM, archetypes and templates). These
> have to do with the structure and semantics of the clinical information and
> underpinned by domain knowledge.
>
>
>
> --
>
> ________________________________________________
> Dr Hugh Leslie MBBS, Dip. Obs. RACOG, FRACGP, FACHI
> Clinical Director
> Ocean Informatics Pty Ltd
> M: +61 404 033 767???E: hugh.leslie at oceaninformatics.com ?W:
> www.oceaninformatics.com
>
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