There have been patches fixing similar issues, for which oe-core has
no tests or ways to reproduce. Rather than ask reviewers to set up
zephyr builds so they can observe the issue, can you add a testcase
for this to devtool's oe-selftest?

Alex

On Wed, 20 May 2026 at 07:18, Jamin Lin via lists.openembedded.org
<[email protected]> wrote:
>
> When a recipe uses multiple git SRC_URI entries with different destsuffix
> values (e.g. Zephyr-based recipes with separate repositories for the
> kernel, modules and application), do_unpack clones each source tree with
> 'git clone -n -s'.
>
> The -s flag uses git's shared-object mechanism:
> instead of copying objects locally it writes a .git/objects/info/alternates 
> file
> pointing back to the bare repository under the downloads directory 
> (DL_DIR/git2/).
>
> git_convert_standalone_clone() is called by devtool_post_unpack to make
> the workspace standalone: it runs 'git repack -a' to copy all objects
> into the local object store and then removes the alternates file.
>
> However it only processes the top-level source directory.  Each nested
> git repo created by a separate SRC_URI entry retains its own alternates
> file still pointing into downloads/.
>
> Steps to reproduce:
>   1. devtool modify <recipe-with-multiple-git-SRC_URI>
>   2. bitbake -c cleanall <recipe>
>   3. bitbake <recipe>
>
> At step 2, 'bitbake -c cleanall' calls fetcher.clean() which deletes
> the bare repositories from downloads/git2/. The top-level workspace
> repo is standalone (alternates already removed by the original code),
> but the nested repos still hold alternates pointing to the now-deleted
> paths.
>
> At step 3, srctree_hash_files() runs 'git add -A .' with a custom
> GIT_INDEX_FILE. Git internally calls 'git status --porcelain=2' on
> each nested repo to check for changes; this fails with exit 128 because
> the nested alternates are broken:
>   error: unable to normalize alternate object path:
>          .../downloads/git2/github.com.zephyrproject-rtos.acpica//objects
>   fatal: bad object HEAD
>   fatal: 'git status --porcelain=2' failed in submodule modules/lib/acpica
>
> This halts the BitBake parse phase with a CalledProcessError and leaves
> the workspace in an unrecoverable state without manual intervention.
>
> Fix by extending git_convert_standalone_clone() to walk the source tree
> and apply the same 'git repack -a' + remove-alternates treatment to
> every nested git repository found, making the entire workspace fully
> standalone at devtool modify time.  The walk uses dirs[:] = [] to stop
> at each git boundary so it never descends into already-converted repos.
>
> Signed-off-by: Jamin Lin <[email protected]>
> ---
>  scripts/lib/scriptutils.py | 28 ++++++++++++++++++++++++----
>  1 file changed, 24 insertions(+), 4 deletions(-)
>
> diff --git a/scripts/lib/scriptutils.py b/scripts/lib/scriptutils.py
> index 32e749dbb1..0a83470373 100644
> --- a/scripts/lib/scriptutils.py
> +++ b/scripts/lib/scriptutils.py
> @@ -100,16 +100,36 @@ def load_plugins(logger, plugins, pluginpath):
>
>
>  def git_convert_standalone_clone(repodir):
> -    """If specified directory is a git repository, ensure it's a standalone 
> clone"""
> +    """
> +    If specified directory is a git repository, ensure it's a standalone 
> clone.
> +    Also converts any nested git repositories (created by multiple SRC_URI 
> git
> +    entries with different destsuffix values) so that none of their contents
> +    depend on the shared downloads directory via alternates.
> +    """
> +
>      import bb.process
> -    if os.path.exists(os.path.join(repodir, '.git')):
> -        alternatesfile = os.path.join(repodir, '.git', 'objects', 'info', 
> 'alternates')
> +
> +    def _convert(gitdir, workdir):
> +        alternatesfile = os.path.join(gitdir, 'objects', 'info', 
> 'alternates')
>          if os.path.exists(alternatesfile):
>              # This will have been cloned with -s, so we need to convert it 
> so none
>              # of the contents is shared
> -            bb.process.run('git repack -a', cwd=repodir)
> +            bb.process.run('git repack -a', cwd=workdir)
>              os.remove(alternatesfile)
>
> +    if os.path.exists(os.path.join(repodir, '.git')):
> +        _convert(os.path.join(repodir, '.git'), repodir)
> +
> +    # Also handle nested git repos created by multiple SRC_URI git entries
> +    # with different destsuffix values. Each nested repo is cloned with -s
> +    # and has its own alternates pointing to the downloads directory.
> +    for root, dirs, files in os.walk(repodir):
> +        if root == repodir:
> +            continue
> +        if '.git' in dirs:
> +            _convert(os.path.join(root, '.git'), root)
> +            dirs[:] = []  # don't recurse into nested repos
> +
>  def _get_temp_recipe_dir(d):
>      # This is a little bit hacky but we need to find a place where we can put
>      # the recipe so that bitbake can find it. We're going to delete it at the
> --
> 2.43.0
>
> 
>
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