I would suggest that PulseAudio only be the default on distros that use
it. I use Debian which doesn't use PulseAudio by default, and somehow
this change seems to have trickled into it as well, judging by the
comment from lib/sound.properties to provide feedback on this Launchpad
bug.

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https://bugs.launchpad.net/bugs/407299

Title:
  openjdk should use pulseaudio by default

Status in “openjdk-6” package in Ubuntu:
  Fix Released

Bug description:
  openjdk-6-jre-headless use alsa by default. This brake things on karmic where 
pulseaudio is default sound system (choppy sound and more). The fix is simple:
  edit /etc/java-6-openjdk/sound.properties and change 

  javax.sound.sampled.Clip=com.sun.media.sound.DirectAudioDeviceProvider
  javax.sound.sampled.Port=com.sun.media.sound.PortMixerProvider
  
javax.sound.sampled.SourceDataLine=com.sun.media.sound.DirectAudioDeviceProvider
  
javax.sound.sampled.TargetDataLine=com.sun.media.sound.DirectAudioDeviceProvider

  to

  
javax.sound.sampled.Clip=org.classpath.icedtea.pulseaudio.PulseAudioMixerProvider
  
javax.sound.sampled.Port=org.classpath.icedtea.pulseaudio.PulseAudioMixerProvider
  
javax.sound.sampled.SourceDataLine=org.classpath.icedtea.pulseaudio.PulseAudioMixerProvider
  
javax.sound.sampled.TargetDataLine=org.classpath.icedtea.pulseaudio.PulseAudioMixerProvider

  
  To reproduce try to use josm (javaopenstreetmap)  and load some sound file... 
this will brake sound if you press pause and play again. After this fix, every 
thing working fine.

  
  lsb_release -rd
  Description:  Ubuntu karmic (development branch)
  Release:      9.10

  apt-cache policy openjdk-6-jre-headless
  openjdk-6-jre-headless:
    Installiert: 6b16~pre4-0ubuntu7
    Kandidat: 6b16~pre4-0ubuntu7
    Versions-Tabelle:
   *** 6b16~pre4-0ubuntu7 0
          500 http://de.archive.ubuntu.com karmic/main Packages
          100 /var/lib/dpkg/status

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