You all are brilliant. This worked just great! I will see if I can get it specified to my own model and parameters. But I may have more questions. We'll see. This helps SO much!
All the very best, Jessie On Thu, May 11, 2017 at 1:08 PM, Jessie Abbate <[email protected]> wrote: > Thanks everyone! I will try this. I'm in a conference today but will be > able to give it a try tonight or tomorrow!! > > More soon, > Jessie > > On Thu, May 11, 2017 at 10:53 AM, Etienne Delay (unilim) < > [email protected]> wrote: > >> Thank's Juste, >> It works fine !! I hop it can help Jessie :-) >> >> E. >> >> Le 11/05/2017 à 08:44, Juste Raimbault a écrit : >> >>> Hi Jessie and Etienne, >>> >>> for the last script to work I think you have to explicitly define the >>> seed in the exploration : >>> >>> val explo_T = >>> ExplorationTask ( //defined exploration task >>> LHS( // defined a method >>> 100, // Number of points of the LHS >>> density in Range(0.0, 100.0) >>> ) x (seed in UniformDistribution[Int]() take 1) >>> ) >>> >>> best >>> >>> Juste >>> >>> >>> 2017-05-11 10:36 GMT+02:00 Etienne Delay (unilim) >>> <[email protected] <mailto:[email protected]>>: >>> >>> >>> Hi Jessie, >>> waiting for a more effective answer. It's fine for you to load and >>> explore a netlogo model in openMole? >>> >>> If not there is information in the market >>> https://www.openmole.org/Documentation_Market%20Place_NetLogo.html >>> <https://www.openmole.org/Documentation_Market%20Place_NetLogo.html> >>> >>> Regarding fire model I have tried something like >>> >>> val density = Val[Double] >>> val seed = Val[Int] >>> val burned = Val[Double] >>> >>> val cmds = >>> List( >>> "random-seed ${seed}", >>> "setup", >>> "while [any? turtles] [go]" >>> ) >>> >>> val fireTask = >>> NetLogo6Task(workDirectory / "Fire.nlogo", cmds) set ( >>> inputs += seed, >>> outputs += (seed, density), >>> netLogoInputs += (density, "density"), >>> netLogoOutputs += ("burned-trees", burned) >>> ) >>> >>> val csvHook = CSVHook(workDirectory / "resultLHS.csv", density, >>> burned, seed) >>> >>> val explo_T = >>> ExplorationTask ( //defined exploration task >>> LHS( // defined a method >>> 100, // Number of points of the LHS >>> density in Range(0.0, 100.0) >>> ) >>> ) >>> >>> >>> //define environement simulation on dektops on 6 threads >>> val env = LocalEnvironment(6) >>> >>> // Define the execution >>> //val ex = (calibrate + (replicateModel on env) + >>> (calibrate.output hook savePopulation hook display)) toExecution // >>> Lauch the execution ex.start >>> >>> explo_T -< (fireTask on env hook csvHook) >>> >>> >>> But it doesn't work ... and my error is >>> >>> org.openmole.core.exception.Us >>> <http://org.openmole.core.exception.Us>erBadDataError: Formal >>> >>> validation of your mole has failed, 1 error(s) has(ve) been found. >>> Input (seed: Int) is missing when reaching the >>> slot@447484616:fireTask@1033578726. >>> In mole: Mole(explo_T@-2070374467,List(explo_T@-2070374467 -< >>> slot@447484616:fireTask@1033578726),List(),PrototypeSet()) >>> >>> E. >>> >>> >>> >>> >>> Le 10/05/2017 à 13:48, Jessie Abbate a écrit : >>> >>> Dear OpenMole developers, >>> >>> I would really like to use this platform for latin hypercube >>> sampling in >>> NetLogo, but am having trouble figuring out how to set it up - >>> even for >>> something as simple as the Fire sampling example. Would anyone be >>> willing to help me out with this? It could be as simple as >>> showing me >>> how it would work for the Fire sampling example, but ideally >>> would >>> involve helping me troubleshoot as I apply it to my own model. >>> >>> Thanks so much in advance. >>> Jessie >>> >>> Also, English is preferred but French is more than fine! >>> >>> -- >>> JL Abbate, PhD >>> Post-doctoral Researcher >>> Laboratoire MIVEGEC (UMR CNRS-IRD-UM1-UM2 5290) >>> Institute of Research for Development (IRD) >>> Montpellier, France >>> +1.804.212.2321 <tel:%2B1.804.212.2321> (US skype/voicemail) >>> +33 6 95 64 21 15 <tel:%2B33%206%2095%2064%2021%2015> (french >>> cell, WhatsApp) >>> http://jessieabbate.wordpress.com/ >>> <http://jessieabbate.wordpress.com/> >>> <mailto:[email protected] <mailto:[email protected] >>> >> >>> >>> >>> _______________________________________________ >>> OpenMOLE-users mailing list >>> [email protected] <mailto:[email protected]> >>> http://fedex.iscpif.fr/mailman/listinfo/openmole-users >>> <http://fedex.iscpif.fr/mailman/listinfo/openmole-users> >>> >>> >>> -- >>> Cordialement >>> >>> Etienne DELAY >>> laboratoire GEOLAB UMR 6042 CNRS >>> Maison des Sciences de l'Homme >>> 4 rue Ledru >>> 63057 Clermont-Ferrand Cedex 1 >>> blog : http://elcep.legtux.org >>> _______________________________________________ >>> OpenMOLE-users mailing list >>> [email protected] <mailto:[email protected]> >>> http://fedex.iscpif.fr/mailman/listinfo/openmole-users >>> <http://fedex.iscpif.fr/mailman/listinfo/openmole-users> >>> >>> >>> >>> >>> _______________________________________________ >>> OpenMOLE-users mailing list >>> [email protected] >>> http://fedex.iscpif.fr/mailman/listinfo/openmole-users >>> >>> >> -- >> Cordialement >> >> Etienne DELAY >> laboratoire GEOLAB UMR 6042 CNRS >> Maison des Sciences de l'Homme >> 4 rue Ledru >> 63057 Clermont-Ferrand Cedex 1 >> blog : http://elcep.legtux.org >> _______________________________________________ >> OpenMOLE-users mailing list >> [email protected] >> http://fedex.iscpif.fr/mailman/listinfo/openmole-users >> > > > > -- > JL Abbate, PhD > Post-doctoral Researcher > Laboratoire MIVEGEC (UMR CNRS-IRD-UM1-UM2 5290) > Institute of Research for Development (IRD) > Montpellier, France > +1.804.212.2321 (US skype/voicemail) > +33 6 95 64 21 15 (french cell, WhatsApp) > http://jessieabbate.wordpress.com/ > <[email protected]> > -- JL Abbate, PhD Post-doctoral Researcher Laboratoire MIVEGEC (UMR CNRS-IRD-UM1-UM2 5290) Institute of Research for Development (IRD) Montpellier, France +1.804.212.2321 (US skype/voicemail) +33 6 95 64 21 15 (french cell, WhatsApp) http://jessieabbate.wordpress.com/ <[email protected]>
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