Hello community, here is the log from the commit of package lapack for openSUSE:Factory checked in at 2018-01-20 11:24:41 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/lapack (Old) and /work/SRC/openSUSE:Factory/.lapack.new (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "lapack" Sat Jan 20 11:24:41 2018 rev:43 rq:564518 version:3.5.0 Changes: -------- --- /work/SRC/openSUSE:Factory/lapack/lapack.changes 2017-06-17 10:20:16.582713138 +0200 +++ /work/SRC/openSUSE:Factory/.lapack.new/lapack.changes 2018-01-20 11:24:42.394000050 +0100 @@ -1,0 +2,6 @@ +Fri Jan 12 14:29:36 UTC 2018 - rguent...@suse.com + +- Package lapack_testing.py from lapack 3.8.0 with adjusted interpreter + and adjust BuildRequires to python3. [bnc#1075766] + +------------------------------------------------------------------- New: ---- lapack_testing.py ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ lapack-man.spec ++++++ --- /var/tmp/diff_new_pack.WNLGlf/_old 2018-01-20 11:24:43.601943576 +0100 +++ /var/tmp/diff_new_pack.WNLGlf/_new 2018-01-20 11:24:43.601943576 +0100 @@ -1,7 +1,7 @@ # # spec file for package lapack-man # -# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany. +# Copyright (c) 2018 SUSE LINUX GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed ++++++ lapack.spec ++++++ --- /var/tmp/diff_new_pack.WNLGlf/_old 2018-01-20 11:24:43.621942641 +0100 +++ /var/tmp/diff_new_pack.WNLGlf/_new 2018-01-20 11:24:43.625942454 +0100 @@ -1,7 +1,7 @@ # # spec file for package lapack # -# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany. +# Copyright (c) 2018 SUSE LINUX GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -24,10 +24,11 @@ Group: Development/Libraries/Parallel Url: http://www.netlib.org/lapack/ Source0: http://www.netlib.org/lapack/%{name}-%{version}.tgz +Source1: lapack_testing.py Source99: baselibs.conf Patch1: lapack-3.2.2.patch BuildRequires: gcc-fortran -BuildRequires: python +BuildRequires: python3 BuildRequires: update-alternatives Requires(pre): update-alternatives BuildRoot: %{_tmppath}/%{name}-%{version}-build @@ -238,6 +239,7 @@ # fix wrong end of line sed -i 's/\r//' LICENSE cd .. +cp %{SOURCE1} . make lapack_testing \ OPTS="%{optflags} $PRECFLAGS" \ NOOPT="%{optflags} $PRECFLAGS -O0" ++++++ lapack_testing.py ++++++ #!/usr/bin/python3 # -*- coding: utf-8 -*- ############################################################################### # lapack_testing.py ############################################################################### from __future__ import print_function from subprocess import Popen, STDOUT, PIPE import os, sys, math import getopt # Arguments try: opts, args = getopt.getopt(sys.argv[1:], "hd:srep:t:n", ["help", "dir", "short", "run", "error","prec=","test=","number"]) except getopt.error as msg: print(msg) print("for help use --help") sys.exit(2) short_summary=0 with_file=1 just_errors = 0 prec='x' test='all' only_numbers=0 test_dir='TESTING' bin_dir='bin/Release' abs_bin_dir=os.path.normpath(os.path.join(os.getcwd(),bin_dir)) for o, a in opts: if o in ("-h", "--help"): print(sys.argv[0]+" [-h|--help] [-d dir |--dir dir] [-s |--short] [-r |--run] [-e |--error] [-p p |--prec p] [-t test |--test test] [-n | --number]") print(" - h is to print this message") print(" - r is to use to run the LAPACK tests then analyse the output (.out files). By default, the script will not run all the LAPACK tests") print(" - d [dir] is to indicate where is the LAPACK testing directory (.out files). By default, the script will use .") print(" LEVEL OF OUTPUT") print(" - x is to print a detailed summary") print(" - e is to print only the error summary") print(" - s is to print a short summary") print(" - n is to print the numbers of failing tests (turn on summary mode)") print(" SECLECTION OF TESTS:") print(" - p [s/c/d/z/x] is to indicate the PRECISION to run:") print(" s=single") print(" d=double") print(" sd=single/double") print(" c=complex") print(" z=double complex") print(" cz=complex/double complex") print(" x=all [DEFAULT]") print(" - t [lin/eig/mixed/rfp/all] is to indicate which TEST FAMILY to run:") print(" lin=Linear Equation") print(" eig=Eigen Problems") print(" mixed=mixed-precision") print(" rfp=rfp format") print(" all=all tests [DEFAULT]") print(" EXAMPLES:") print(" ./lapack_testing.py -n") print(" Will return the numbers of failed tests by analyzing the LAPACK output") print(" ./lapack_testing.py -n -r -p s") print(" Will return the numbers of failed tests in REAL precision by running the LAPACK Tests then analyzing the output") print(" ./lapack_testing.py -n -p s -t eig ") print(" Will return the numbers of failed tests in REAL precision by analyzing only the LAPACK output of EIGEN testings") print("Written by Julie Langou (June 2011) ") sys.exit(0) else: if o in ("-s", "--short"): short_summary = 1 if o in ("-r", "--run"): with_file = 0 if o in ("-e", "--error"): just_errors = 1 if o in ( '-p', '--prec' ): prec = a if o in ( '-d', '--dir' ): test_dir = a if o in ( '-t', '--test' ): test = a if o in ( '-n', '--number' ): only_numbers = 1 short_summary = 1 # process options os.chdir(test_dir) execution=1 summary="\n\t\t\t--> LAPACK TESTING SUMMARY <--\n"; if with_file: summary+= "\t\tProcessing LAPACK Testing output found in the "+test_dir+" directory\n"; summary+="SUMMARY \tnb test run \tnumerical error \tother error \n"; summary+="================ \t===========\t=================\t================ \n"; nb_of_test=0 # Add current directory to the path for subshells of this shell # Allows the popen to find local files in both windows and unixes os.environ["PATH"] = os.environ["PATH"]+":." # Define a function to open the executable (different filenames on unix and Windows) def run_summary_test( f, cmdline, short_summary): nb_test_run=0 nb_test_fail=0 nb_test_illegal=0 nb_test_info=0 if (with_file): if not os.path.exists(cmdline): error_message=cmdline+" file not found" r=1 if short_summary: return [nb_test_run,nb_test_fail,nb_test_illegal,nb_test_info] else: pipe = open(cmdline,'r') r=0 else: if os.name != 'nt': cmdline='./' + cmdline else : cmdline=abs_bin_dir+os.path.sep+cmdline outfile=cmdline.split()[4] #pipe = open(outfile,'w') p = Popen(cmdline, shell=True)#, stdout=pipe) p.wait() #pipe.close() r=p.returncode pipe = open(outfile,'r') error_message=cmdline+" did not work" if r != 0 and not with_file: print("---- TESTING " + cmdline.split()[0] + "... FAILED(" + error_message +") !") for line in pipe.readlines(): f.write(str(line)) elif r != 0 and with_file and not short_summary: print("---- WARNING: please check that you have the LAPACK output : "+cmdline+"!") print("---- WARNING: with the option -r, we can run the LAPACK testing for you") # print "---- "+error_message else: for line in pipe.readlines(): f.write(str(line)) words_in_line=line.split() if (line.find("run")!=-1): # print line whereisrun=words_in_line.index("run)") nb_test_run+=int(words_in_line[whereisrun-2]) if (line.find("out of")!=-1): if (short_summary==0): print(line, end=' ') whereisout= words_in_line.index("out") nb_test_fail+=int(words_in_line[whereisout-1]) if ((line.find("illegal")!=-1) or (line.find("Illegal")!=-1)): if (short_summary==0):print(line, end=' ') nb_test_illegal+=1 if (line.find(" INFO")!=-1): if (short_summary==0):print(line, end=' ') nb_test_info+=1 if (with_file==1): pipe.close() f.flush(); return [nb_test_run,nb_test_fail,nb_test_illegal,nb_test_info] # If filename cannot be opened, send output to sys.stderr filename = "testing_results.txt" try: f = open(filename, 'w') except IOError: f = sys.stdout if (short_summary==0): print(" ") print("---------------- Testing LAPACK Routines ----------------") print(" ") print("-- Detailed results are stored in", filename) dtypes = ( ("s", "d", "c", "z"), ("REAL ", "DOUBLE PRECISION", "COMPLEX ", "COMPLEX16 "), ) if prec=='s': range_prec=[0] elif prec=='d': range_prec=[1] elif prec=='sd': range_prec=[0,1] elif prec=='c': range_prec=[2] elif prec=='z': range_prec=[3] elif prec=='cz': range_prec=[2,3] else: prec='x'; range_prec=list(range(4)) if test=='lin': range_test=[16] elif test=='mixed': range_test=[17] range_prec=[1,3] elif test=='rfp': range_test=[18] elif test=='eig': range_test=list(range(16)) else: range_test=list(range(19)) list_results = [ [0, 0, 0, 0, 0], [0, 0, 0, 0, 0], [0, 0, 0, 0, 0], [0, 0, 0, 0, 0], ] for dtype in range_prec: letter = dtypes[0][dtype] name = dtypes[1][dtype] if (short_summary==0): print(" ") print("------------------------- %s ------------------------" % name) print(" ") sys.stdout.flush() dtests = ( ("nep", "sep", "se2", "svd", letter+"ec",letter+"ed",letter+"gg", letter+"gd",letter+"sb",letter+"sg", letter+"bb","glm","gqr", "gsv","csd","lse", letter+"test", letter+dtypes[0][dtype-1]+"test",letter+"test_rfp"), ("Nonsymmetric-Eigenvalue-Problem", "Symmetric-Eigenvalue-Problem", "Symmetric-Eigenvalue-Problem-2-stage", "Singular-Value-Decomposition", "Eigen-Condition","Nonsymmetric-Eigenvalue","Nonsymmetric-Generalized-Eigenvalue-Problem", "Nonsymmetric-Generalized-Eigenvalue-Problem-driver", "Symmetric-Eigenvalue-Problem", "Symmetric-Eigenvalue-Generalized-Problem", "Banded-Singular-Value-Decomposition-routines", "Generalized-Linear-Regression-Model-routines", "Generalized-QR-and-RQ-factorization-routines", "Generalized-Singular-Value-Decomposition-routines", "CS-Decomposition-routines", "Constrained-Linear-Least-Squares-routines", "Linear-Equation-routines", "Mixed-Precision-linear-equation-routines","RFP-linear-equation-routines"), (letter+"nep", letter+"sep", letter+"se2", letter+"svd", letter+"ec",letter+"ed",letter+"gg", letter+"gd",letter+"sb",letter+"sg", letter+"bb",letter+"glm",letter+"gqr", letter+"gsv",letter+"csd",letter+"lse", letter+"test", letter+dtypes[0][dtype-1]+"test",letter+"test_rfp"), ) for dtest in range_test: nb_of_test=0 # NEED TO SKIP SOME PRECISION (namely s and c) FOR PROTO MIXED PRECISION TESTING if dtest==17 and (letter=="s" or letter=="c"): continue if (with_file==1): cmdbase=dtests[2][dtest]+".out" else: if dtest==16: # LIN TESTS cmdbase="xlintst"+letter+" < "+dtests[0][dtest]+".in > "+dtests[2][dtest]+".out" elif dtest==17: # PROTO LIN TESTS cmdbase="xlintst"+letter+dtypes[0][dtype-1]+" < "+dtests[0][dtest]+".in > "+dtests[2][dtest]+".out" elif dtest==18: # PROTO LIN TESTS cmdbase="xlintstrf"+letter+" < "+dtests[0][dtest]+".in > "+dtests[2][dtest]+".out" else: # EIG TESTS cmdbase="xeigtst"+letter+" < "+dtests[0][dtest]+".in > "+dtests[2][dtest]+".out" if (not just_errors and not short_summary): print("Testing "+name+" "+dtests[1][dtest]+"-"+cmdbase, end=' ') # Run the process: either to read the file or run the LAPACK testing nb_test = run_summary_test(f, cmdbase, short_summary) list_results[0][dtype]+=nb_test[0] list_results[1][dtype]+=nb_test[1] list_results[2][dtype]+=nb_test[2] list_results[3][dtype]+=nb_test[3] got_error=nb_test[1]+nb_test[2]+nb_test[3] if (not short_summary): if (nb_test[0]>0 and just_errors==0): print("passed: "+str(nb_test[0])) if (nb_test[1]>0): print("failing to pass the threshold: "+str(nb_test[1])) if (nb_test[2]>0): print("Illegal Error: "+str(nb_test[2])) if (nb_test[3]>0): print("Info Error: "+str(nb_test[3])) if (got_error>0 and just_errors==1): print("ERROR IS LOCATED IN "+name+" "+dtests[1][dtest]+" [ "+cmdbase+" ]") print("") if (just_errors==0): print("") # elif (got_error>0): # print dtests[2][dtest]+".out \t"+str(nb_test[1])+"\t"+str(nb_test[2])+"\t"+str(nb_test[3]) sys.stdout.flush() if (list_results[0][dtype] > 0 ): percent_num_error=float(list_results[1][dtype])/float(list_results[0][dtype])*100 percent_error=float(list_results[2][dtype]+list_results[3][dtype])/float(list_results[0][dtype])*100 else: percent_num_error=0 percent_error=0 summary+=name+"\t"+str(list_results[0][dtype])+"\t\t"+str(list_results[1][dtype])+"\t("+"%.3f" % percent_num_error+"%)\t"+str(list_results[2][dtype]+list_results[3][dtype])+"\t("+"%.3f" % percent_error+"%)\t""\n" list_results[0][4]+=list_results[0][dtype] list_results[1][4]+=list_results[1][dtype] list_results[2][4]+=list_results[2][dtype] list_results[3][4]+=list_results[3][dtype] if only_numbers==1: print(str(list_results[1][4])+"\n"+str(list_results[2][4]+list_results[3][4])) else: print(summary) if (list_results[0][4] > 0 ): percent_num_error=float(list_results[1][4])/float(list_results[0][4])*100 percent_error=float(list_results[2][4]+list_results[3][4])/float(list_results[0][4])*100 else: percent_num_error=0 percent_error=0 if (prec=='x'): print("--> ALL PRECISIONS\t"+str(list_results[0][4])+"\t\t"+str(list_results[1][4])+"\t("+"%.3f" % percent_num_error+"%)\t"+str(list_results[2][4]+list_results[3][4])+"\t("+"%.3f" % percent_error+"%)\t""\n") if list_results[0][4] == 0: print("NO TESTS WERE ANALYZED, please use the -r option to run the LAPACK TESTING") # This may close the sys.stdout stream, so make it the last statement f.close()
