Hello community, here is the log from the commit of package python-astropy for openSUSE:Factory checked in at 2020-04-21 13:12:32 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/python-astropy (Old) and /work/SRC/openSUSE:Factory/.python-astropy.new.2738 (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-astropy" Tue Apr 21 13:12:32 2020 rev:9 rq:795889 version:4.0.1.post1 Changes: -------- --- /work/SRC/openSUSE:Factory/python-astropy/python-astropy.changes 2020-01-07 23:57:30.448160688 +0100 +++ /work/SRC/openSUSE:Factory/.python-astropy.new.2738/python-astropy.changes 2020-04-21 13:12:34.657040888 +0200 @@ -1,0 +2,159 @@ +Sun Apr 19 10:53:30 UTC 2020 - Benjamin Greiner <[email protected]> + +- Update to 4.0.1.post1 + * astropy.config + [gh#astropy/astropy#9975] + Fixed a bug where importing a development version of a package that + uses ``astropy`` configuration system can result in a + ``~/.astropy/config/package..cfg`` file. + * astropy.coordinates + [gh#astropy/astropy#9815] + Fixed a bug where a vestigal trace of a frame class could persist in the + transformation graph even after the removal of all transformations involving + that frame class. + [gh#astropy/astropy#9815] + Fixed a bug with ``TransformGraph.remove_transform()`` when the "from" and + "to" frame classes are not explicitly specified. + [gh#astropy/astropy#9900] + Read-only longitudes can now be passed in to ``EarthLocation`` even if + they include angles outside of the range of -180 to 180 degrees. + [gh#astropy/astropy#9980] + ```SkyCoord.radial_velocity_correction``` no longer raises an Exception + when space motion information is present on the SkyCoord. + * astropy.io + [gh#astropy/astropy#9866] + Fixed a bug that prevented the unified I/O infrastructure from working with + datasets that are represented by directories rather than files. + * astropy.io.ascii + [gh#astropy/astropy#9918] + Fixed a bug in the ``fast_reader`` C parsers incorrectly returning entries + of isolated positive/negative signs as ``float`` instead of ``str``. + [gh#astropy/astropy#9923] + Fixed a segmentation fault in the ``fast_reader`` C parsers when parsing an + invalid file with ``guess=True`` and the file contains inconsistent column + numbers in combination with a quoted field; e.g., ``"1 2\n 3 4 '5'"``. + [gh#astropy/astropy#9933] + Magnitude, decibel, and dex can now be stored in ``ecsv`` files. + * astropy.io.misc + [gh#astropy/astropy#9933] + Magnitude, decibel, and dex can now be stored in ``hdf5`` files. + [gh#astropy/astropy#9956, gh#astropy/astropy#9961] + Fixed serialization of polynomial models to include non default values of + domain and window values. + [gh#astropy/astropy#9950] + Fixed a bug which affected overwriting tables within ``hdf5`` files. + Overwriting an existing path with associated column meta data now also + overwrites the meta data associated with the table. + [gh#astropy/astropy#9983] + Fixed serialization of Time objects with location under time-1.0.0 + ASDF schema. + * astropy.io.fits + [gh#astropy/astropy#9711, gh#astropy/astropy#9934] + Fix regression with ``GroupsHDU`` which needs to modify the header to handle + invalid headers, and fix accesing ``.data`` for empty HDU. + [gh#astropy/astropy#9711] + Fix ``fitsdiff`` when its arguments are directories that contain other + directories. + [gh#astropy/astropy#9958] + Fix writing noncontiguous data to a compressed HDU. + [gh#astropy/astropy#9978] + Added verification of ``disp`` (``TDISP``) keyword to ``fits.Column`` and + extended tests for ``TFORM`` and ``TDISP`` validation. + [gh#astropy/astropy#10012] + Fix checksum verification to process all HDUs instead of only the first one + because of the lazy loading feature. + [gh#astropy/astropy#10030] + Allow passing ``output_verify`` to ``.close`` when using the context manager. + [gh#astropy/astropy#10041] + Prevent instantiation of ``PrimaryHDU`` and ``ImageHDU`` with a scalar. + [gh#astropy/astropy#10069] + Fix column access by attribute with FITS_rec: columns with scaling or columns + from ASCII tables where not properly converted when accessed by attribute + name. + * astropy.io.misc + [gh#astropy/astropy#9933] + Magnitude, decibel, and dex can now be stored in ``hdf5`` files. + [gh#astropy/astropy#9956, gh#astropy/astropy#9961] + Fixed serialization of polynomial models to include non default values of + domain and window values. + [gh#astropy/astropy#9950] + Fixed a bug which affected overwriting tables within ``hdf5`` files. + Overwriting an existing path with associated column meta data now also + overwrites the meta data associated with the table. + [gh#astropy/astropy#9983] + Fixed serialization of Time objects with location under time-1.0.0 + ASDF schema. + * astropy.modeling + [gh#astropy/astropy#9987] + Fixed a bug in setting default values of parameters of orthonormal + polynomials when constructing a model set. + * astropy.table + [gh#astropy/astropy#9839] + Fixed bug in ``Table.reverse`` for tables that contain non-mutable mixin columns + (like ``SkyCoord``) for which in-place item update is not allowed. + [gh#astropy/astropy#9933] + Tables containing Magnitude, decibel, and dex columns can now be saved to + ``ecsv`` files. + [gh#astropy/astropy#10027] + Fixed bug where adding or inserting a row fails on a table with an index + defined on a column that is not the first one. + [gh#astropy/astropy#10068] + Ensured that ``table.show_in_browser`` also worked for mixin columns like + ``Time`` and ``SkyCoord``. + * astropy.time + [gh#astropy/astropy#9679] + Fix inaccuracy when converting between TimeDelta and datetime.timedelta. + [gh#astropy/astropy#9812] + Fixed exception when changing ``format`` in the case when ``out_subfmt`` is + defined and is incompatible with the new format. + [gh#astropy/astropy#9812] + Fixed exceptions in ``Time.to_value()``: when supplying any ``subfmt`` argument + for string-based formats like 'iso', and for ``subfmt='long'`` for the formats + 'byear', 'jyear', and 'decimalyear'. + [gh#astropy/astropy#9969] + Fixed bug where the location attribute was lost when creating a new ``Time`` + object from an existing ``Time`` or list of ``Time`` objects. + [gh#astropy/astropy#10034] + Fixed a bug where an exception occurred when creating a ``Time`` object + if the ``val1`` argument was a regular double and the ``val2`` argument + was a ``longdouble``. + * astropy.timeseries + [gh#astropy/astropy#10013] + Fixed issue with reference time for the ``transit_time`` parameter returned by + the ``BoxLeastSquares`` periodogram. Now, the ``transit_time`` will be within + the range of the input data and arbitrary time offsets/zero points no longer + affect results. + * astropy.units + [gh#astropy/astropy#9948] + Fix for ``quantity_input`` annotation raising an exception on iterable + types that don't define a general ``__contains__`` for checking if ``None`` + is contained (e.g. Enum as of python3.8), by instead checking for instance of + Sequence. + [gh#astropy/astropy#10066] + Fix for ``u.Quantity`` not taking into account ``ndmin`` if constructed from + another ``u.Quantity`` instance with different but convertible unit + * astropy.utils + [gh#astropy/astropy#9981] + Fixed ``deprecated_renamed_argument`` not passing in user value to + deprecated keyword when the keyword has no new name. + [gh#astropy/astropy#9985] + Fixed ``deprecated_renamed_argument`` not issuing a deprecation warning when + deprecated keyword without new name is passed in as positional argument. + [gh#astropy/astropy#10007] + Fixed detection of read-only filesystems in the caching code. + * astropy.visualization + [gh#astropy/astropy#9848] + Fixed bug from matplotlib >=3.1 where an empty Quantity array is + sent for unit conversion as an empty list. + [gh#astropy/astropy#9913] + Fix bug in ``ZScaleInterval`` to return the array minimum and + maximum when there are less then ``min_npixels`` in the input array. + [gh#astropy/astropy#8004, gh#astropy/astropy#9991] + Fix a bug in simplifying axis labels that affected non-rectangular frames. + * Increase minimum asdf version to 2.5.2. + [gh#astropy/astropy#9996, gh#astropy/astropy#9819] + * Updated wcslib to v7.2. [gh#astropy/astropy#10021] +- updated test requirements and recommends +- run pytest directly + +------------------------------------------------------------------- Old: ---- astropy-4.0.tar.gz New: ---- astropy-4.0.1.post1.tar.gz ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ python-astropy.spec ++++++ --- /var/tmp/diff_new_pack.45fxcG/_old 2020-04-21 13:12:35.873043313 +0200 +++ /var/tmp/diff_new_pack.45fxcG/_new 2020-04-21 13:12:35.877043321 +0200 @@ -19,7 +19,7 @@ %{?!python_module:%define python_module() python-%{**} python3-%{**}} %define skip_python2 1 Name: python-astropy -Version: 4.0 +Version: 4.0.1.post1 Release: 0 Summary: Community-developed python astronomy tools License: BSD-3-Clause @@ -31,9 +31,7 @@ BuildRequires: %{python_module Cython >= 0.21} BuildRequires: %{python_module astropy-helpers} BuildRequires: %{python_module devel} -BuildRequires: %{python_module ipython} -BuildRequires: %{python_module matplotlib >= 2.1} -BuildRequires: %{python_module numpy-devel >= 1.7.0} +BuildRequires: %{python_module numpy-devel >= 1.16} BuildRequires: %{python_module ply} BuildRequires: %{python_module setuptools} BuildRequires: fdupes @@ -53,34 +51,40 @@ Recommends: libxml2-tools Recommends: python-Jinja2 Recommends: python-PyYAML +Recommends: python-asdf >= 2.5 Recommends: python-beautifulsoup4 +Recommends: python-Bottleneck Recommends: python-bleach Recommends: python-h5py +Recommends: python-ipython Recommends: python-jplephem Recommends: python-matplotlib >= 2.1 Recommends: python-pandas Recommends: python-scikit-image -Recommends: python-scipy +Recommends: python-scipy >= 0.18 Conflicts: perl-Data-ShowTable # SECTION Optional requirements +BuildRequires: %{python_module Bottleneck} BuildRequires: %{python_module Jinja2} BuildRequires: %{python_module PyYAML} +BuildRequires: %{python_module asdf >= 2.5} BuildRequires: %{python_module beautifulsoup4} BuildRequires: %{python_module bleach} BuildRequires: %{python_module h5py} +BuildRequires: %{python_module ipython} BuildRequires: %{python_module jplephem} +BuildRequires: %{python_module matplotlib >= 2.1} BuildRequires: %{python_module pandas} -BuildRequires: %{python_module scipy} +BuildRequires: %{python_module scikit-image} +BuildRequires: %{python_module scipy >= 0.18} # /SECTION # SECTION test requirements -BuildRequires: %{python_module dbm} BuildRequires: %{python_module mpmath} -BuildRequires: %{python_module pytest >= 3.1.0} -BuildRequires: %{python_module pytest-arraydiff >= 0.1} +BuildRequires: %{python_module objgraph} +BuildRequires: %{python_module pytest >= 3.1} BuildRequires: %{python_module pytest-astropy} BuildRequires: %{python_module pytest-doctestplus} -BuildRequires: %{python_module pytest-openfiles} -BuildRequires: %{python_module pytest-remotedata} +BuildRequires: %{python_module pytest-mpl} # /SECTION %python_subpackages @@ -108,9 +112,14 @@ %install %python_install --use-system-libraries --offline +chmod a-x %{buildroot}%{python_sitearch}/astropy/wcs/tests/data/header_with_time.fits + # Deduplicating files can generate a RPMLINT warning for pyc mtime %{python_expand %fdupes %{buildroot}%{$python_sitearch} +rm -rf %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/__pycache__/__init__.*.pyc rm -rf %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/*_test.*.pyc +rm -rf %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/__init__.*.pyc +rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/__pycache__/__init__.*.pyc rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/extension/__pycache__/__init__.*.pyc $python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/ $python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/ @@ -125,12 +134,16 @@ %check export PYTHONDONTWRITEBYTECODE=1 -pushd static -%{python_expand export PYTHONPATH="%{buildroot}%{$python_sitearch}" -$python -B -c "import astropy;astropy.test()" -rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/extension/build +# http://docs.astropy.org/en/latest/development/testguide.html#running-tests +%python_exec setup.py build_ext --inplace --offline +%ifarch aarch64 +# doctest failure because of precision errors + %define skippytest -k 'not bayesian_info_criterion_lsq' +%endif +%{pytest_arch -W "ignore:the imp module is deprecated:DeprecationWarning" \ + -W "ignore:Unknown pytest.mark.openfiles_ignore:pytest.PytestUnknownMarkWarning" \ + --ignore "docs/whatsnew" %{?skippytest} } -popd %files %{python_files} %doc CHANGES.rst README.rst
