Hello community, here is the log from the commit of package R-base for openSUSE:Factory checked in at 2020-10-13 15:46:27 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/R-base (Old) and /work/SRC/openSUSE:Factory/.R-base.new.3486 (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "R-base" Tue Oct 13 15:46:27 2020 rev:76 rq:841472 version:unknown Changes: -------- --- /work/SRC/openSUSE:Factory/R-base/R-base.changes 2020-06-29 21:18:25.873796231 +0200 +++ /work/SRC/openSUSE:Factory/.R-base.new.3486/R-base.changes 2020-10-13 15:47:26.921496403 +0200 @@ -1,0 +2,117 @@ +Sat Oct 10 18:43:26 UTC 2020 - Detlef Steuer <detlef.ste...@gmx.de> + +- CHANGES IN R 4.0.3: + + NEW FEATURES: + + * On platforms using configure option --with-internal-tzcode, + additional values "internal" and (on macOS only) "macOS" are + accepted for the environment variable TZDIR. (See ?TZDIR.) + + On macOS, "macOS" is used by default if the system timezone + database is a newer version than that in the R installation. + + * When install.packages(type = "source") fails to find a package in + a repository it mentions package versions which are excluded by + their R version requirement and links to hints on why a package + might not be found. + + * The default value for options("timeout") can be set from + enviromnent variable R_DEFAULT_INTERNET_TIMEOUT, still defaulting + to 60 (seconds) if that is not set or invalid. + + This may be needed when child R processes are doing downloads, + for example during the installation of source packages which + download jars or other forms of data. + + LINK-TIME OPTIMIZATION on a UNIX-ALIKE: + + * There is now support for parallelized Link-Time Optimization + (LTO) with GCC and for 'thin' LTO with clang _via_ setting the + LTO macro. + + * There is support for setting a different LTO flag for the Fortran + compiler, including to empty when mixing clang and gfortran (as + on macOS). See file config.site. + + * There is a new LTO_LD macro to set linker options for LTO + compilation, for example to select an alternative linker or to + parallelize thin LTO. + + DEPRECATED AND DEFUNCT: + + * The LINPACK argument to chol.default(), chol2inv(), + solve.default() and svd() has been defunct since R 3.1.0. Using + it now gives a warning which will become an error in R 4.1.0. + + BUG FIXES: + + * The code mitigating stack overflow with PCRE regexps on very long + strings is enabled for PCRE2 < 10.30 also when JIT is enabled, + since stack overflows have been seen in that case. + + * Fix to correctly show the group labels in dotchart() (which where + lost in the ylab improvement for R 4.0.0). + + * addmargins(*, ..) now also works when fn() is a local function, + thanks to bug report and patch PR#17124 from Alex Bertram. + + * rank(x) and hence sort(x) now work when x is an object (as per + is.object(x)) of type "raw" _and_ provides a valid `[` method, + e.g., for gmp::as.bigz(.) numbers. + + * chisq.test(*, simulate.p.value=TRUE) and r2dtable() now work + correctly for large table entries (in the millions). Reported by + Sebastian Meyer and investigated by more helpers in PR#16184. + + * Low-level socket read/write operations have been fixed to + correctly signal communication errors. Previously, such errors + could lead to a segfault due to invalid memory access. Reported + and debugged by Dmitriy Selivanov in PR#17850. + + * quantile(x, pr) works more consistently for pr values slightly + outside [0,1], thanks to Suharto Anggono's PR#17891. + + Further, quantile(x, prN, names=FALSE) now works even when prN + contains NAs, thanks to Anggono's PR#17892. Ditto for ordered + factors or Date objects when type = 1 or 3, thanks to PR#17899. + + * Libcurl-based internet access, including curlGetHeaders(), was + not respecting the "timeout" option. If this causes + unanticipated timeouts, consider increasing the default by + setting R_DEFAULT_INTERNET_TIMEOUT. + + * as.Date(<char>) now also works with an initial "", thanks to + Michael Chirico's PR#17909. + + * isS3stdGeneric(f) now detects an S3 generic also when it it is + trace()d, thanks to Gabe Becker's PR#17917. + + * R_allocLD() has been fixed to return memory aligned for long + double type PR#16534. + + * fisher.test() no longer segfaults when called again after its + internal stack has been exceeded PR#17904. + + * Accessing a long vector represented by a compact integer sequence + no longer segfaults (reported and debugged by Hugh Parsonage). + + * duplicated() now works also for strings with multiple encodings + inside a single vector PR#17809. + + * phyper(11, 15, 0, 12, log.p=TRUE) no longer gives NaN; reported + as PR#17271 by Alexey Stukalov. + + * Fix incorrect calculation in logLik.nls() PR#16100, patch from + Sebastian Meyer. + + * A very old bug could cause a segfault in model.matrix() when + terms involved logical variables. Part of PR#17879. + + * model.frame.default() allowed data = 1, leading to involuntary + variable capture (rest of PR#17879). + + * tar() no longer skips non-directory files, thanks to a patch by + Sebastian Meyer, fixing the remaining part of PR#16716. + +------------------------------------------------------------------- Old: ---- R-4.0.2.tar.bz2 New: ---- R-4.0.3.tar.bz2 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ R-base.spec ++++++ --- /var/tmp/diff_new_pack.ngldDH/_old 2020-10-13 15:47:28.501497084 +0200 +++ /var/tmp/diff_new_pack.ngldDH/_new 2020-10-13 15:47:28.505497086 +0200 @@ -25,7 +25,7 @@ %define release 1 Name: R-base -Version: 4.0.2 +Version: 4.0.3 Release: %release %define Rversion %{version} Source0: R-%{version}.tar.bz2 ++++++ R-4.0.2.tar.bz2 -> R-4.0.3.tar.bz2 ++++++ /work/SRC/openSUSE:Factory/R-base/R-4.0.2.tar.bz2 /work/SRC/openSUSE:Factory/.R-base.new.3486/R-4.0.3.tar.bz2 differ: char 11, line 1