Hello community,
here is the log from the commit of package hdf5 for openSUSE:Factory checked in
at 2012-09-17 16:57:16
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Comparing /work/SRC/openSUSE:Factory/hdf5 (Old)
and /work/SRC/openSUSE:Factory/.hdf5.new (New)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "hdf5", Maintainer is "pgaj...@suse.com"
Changes:
--------
--- /work/SRC/openSUSE:Factory/hdf5/hdf5.changes 2012-06-26
15:52:16.000000000 +0200
+++ /work/SRC/openSUSE:Factory/.hdf5.new/hdf5.changes 2012-09-17
16:57:17.000000000 +0200
@@ -1,0 +2,6 @@
+Fri Sep 7 17:24:21 UTC 2012 - sco...@free.fr
+
+- parallel versions for openmpi and mvapich2
+- add baselibs.conf
+
+-------------------------------------------------------------------
New:
----
baselibs.conf
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Other differences:
------------------
++++++ hdf5.spec ++++++
--- /var/tmp/diff_new_pack.AaAJVM/_old 2012-09-17 16:57:18.000000000 +0200
+++ /var/tmp/diff_new_pack.AaAJVM/_new 2012-09-17 16:57:18.000000000 +0200
@@ -19,6 +19,12 @@
%define hdf5_libver 0
%define libname libhdf5
+%if 0%{?sles_version}
+%define _mpi openmpi mvapich2
+%else
+%define _mpi openmpi
+%endif
+
Name: hdf5
Version: 1.8.9
Release: 0
@@ -45,6 +51,10 @@
%if 0%{?suse_version} >= 1110
BuildRequires: fdupes
%endif
+BuildRequires: openmpi-devel
+%if 0%{?sles_version}
+BuildRequires: mvapich2-devel
+%endif
%description
HDF5 is a general purpose library and file format for storing scientific data.
@@ -118,6 +128,144 @@
%description examples
Examples of HDF5 library use.
+
+%package -n %{name}-openmpi
+Summary: A general purpose library and file format for storing
scientific data
+Group: Development/Libraries/Other
+
+%description -n %{name}-openmpi
+HDF5 is a general purpose library and file format for storing scientific data.
+HDF5 can store two primary objects: datasets and groups. A dataset is
+essentially a multidimensional array of data elements, and a group is a
+structure for organizing objects in an HDF5 file. Using these two basic
+objects, one can create and store almost any kind of scientific data
+structure, such as images, arrays of vectors, and structured and unstructured
+grids. You can also mix and match them in HDF5 files according to your needs.
+
+%package -n %{libname}-%{hdf5_libver}-openmpi
+Summary: HDF 5 runtime libraries
+Group: System/Libraries
+
+%description -n %{libname}-%{hdf5_libver}-openmpi
+The HDF project involves the development and support of software and
+file formats for scientific data management. The HDF software includes
+I/O libraries and tools for analyzing, visualizing, and converting
+scientific data.
+
+This package contains the HDF 5 runtime libraries.
+
+%package -n %{libname}_hl%{hdf5_libver}-openmpi
+Summary: HDF 5 runtimelibraries
+Group: System/Libraries
+
+%description -n %{libname}_hl%{hdf5_libver}-openmpi
+The HDF project involves the development and support of software and
+file formats for scientific data management. The HDF software includes
+I/O libraries and tools for analyzing, visualizing, and converting
+scientific data.
+
+This package contains the HDF 5 runtime libraries.
+
+%package openmpi-devel
+Summary: Hierarchical Data File Format Version 5
+Group: Development/Libraries/Parallel
+Requires: %{name}-openmpi = %{version}
+# Required by Fortran programs?
+Requires: %{libname}-%{hdf5_libver}-openmpi = %{version}
+Requires: %{libname}_hl%{hdf5_libver}-openmpi = %{version}
+
+%description openmpi-devel
+The HDF project involves the development and support of software and
+file formats for scientific data management. The HDF software includes
+I/O libraries and tools for analyzing, visualizing, and converting
+scientific data.
+
+This package contains all files needed to create projects that use
+hdf5.
+
+%package openmpi-devel-static
+Summary: Hierarchical Data File Format Version 5 - static libraries
+Group: Development/Libraries/C and C++
+Requires: hdf5-openmpi-devel
+
+%description openmpi-devel-static
+The HDF project involves the development and support of software and
+file formats for scientific data management. The HDF software includes
+I/O libraries and tools for analyzing, visualizing, and converting
+scientific data.
+
+This package provides the static libraries.
+
+
+%if 0%{?sles_version}
+%package -n %{name}-mvapich2
+Summary: A general purpose library and file format for storing
scientific data
+Group: Development/Libraries/Other
+
+%description -n %{name}-mvapich2
+HDF5 is a general purpose library and file format for storing scientific data.
+HDF5 can store two primary objects: datasets and groups. A dataset is
+essentially a multidimensional array of data elements, and a group is a
+structure for organizing objects in an HDF5 file. Using these two basic
+objects, one can create and store almost any kind of scientific data
+structure, such as images, arrays of vectors, and structured and unstructured
+grids. You can also mix and match them in HDF5 files according to your needs.
+
+%package -n %{libname}-%{hdf5_libver}-mvapich2
+Summary: HDF 5 runtime libraries
+Group: System/Libraries
+
+%description -n %{libname}-%{hdf5_libver}-mvapich2
+The HDF project involves the development and support of software and
+file formats for scientific data management. The HDF software includes
+I/O libraries and tools for analyzing, visualizing, and converting
+scientific data.
+
+This package contains the HDF 5 runtime libraries.
+
+%package -n %{libname}_hl%{hdf5_libver}-mvapich2
+Summary: HDF 5 runtimelibraries
+Group: System/Libraries
+
+%description -n %{libname}_hl%{hdf5_libver}-mvapich2
+The HDF project involves the development and support of software and
+file formats for scientific data management. The HDF software includes
+I/O libraries and tools for analyzing, visualizing, and converting
+scientific data.
+
+This package contains the HDF 5 runtime libraries.
+
+%package mvapich2-devel
+Summary: Hierarchical Data File Format Version 5
+Group: Development/Libraries/Parallel
+Requires: %{name}-mvapich2 = %{version}
+# Required by Fortran programs?
+Requires: %{libname}-%{hdf5_libver}-mvapich2 = %{version}
+Requires: %{libname}_hl%{hdf5_libver}-mvapich2 = %{version}
+
+%description mvapich2-devel
+The HDF project involves the development and support of software and
+file formats for scientific data management. The HDF software includes
+I/O libraries and tools for analyzing, visualizing, and converting
+scientific data.
+
+This package contains all files needed to create projects that use
+hdf5.
+
+%package mvapich2-devel-static
+Summary: Hierarchical Data File Format Version 5 - static libraries
+Group: Development/Libraries/C and C++
+Requires: hdf5-mvapich2-devel
+
+%description mvapich2-devel-static
+The HDF project involves the development and support of software and
+file formats for scientific data management. The HDF software includes
+I/O libraries and tools for analyzing, visualizing, and converting
+scientific data.
+
+This package provides the static libraries.
+%endif
+
%prep
%setup -q
%patch0 -p1 -b .LD_LIBRARY_PATH
@@ -127,6 +275,13 @@
%patch4 -p0 -b .tests-arm
%endif
+set -- *
+for mpi in %_mpi
+do
+ mkdir $mpi
+ cp -ap "$@" $mpi
+done
+
%build
export CC=gcc
export CXX=g++
@@ -146,6 +301,32 @@
make %{?_smp_mflags}
+for mpi in %_mpi;
+do
+cd $mpi
+export CC="%{_libdir}/mpi/gcc/$mpi/bin/mpicc"
+export FC="%{_libdir}/mpi/gcc/$mpi/bin/mpif90"
+export F77="%{_libdir}/mpi/gcc/$mpi/bin/mpif77"
+export LD_LIBRARY_PATH=%{_libdir}/mpi/gcc/$mpi/%_lib
+%configure \
+ --prefix=%{_libdir}/mpi/gcc/$mpi \
+ --bindir=%{_libdir}/mpi/gcc/$mpi/bin \
+ --libdir=%{_libdir}/mpi/gcc/$mpi/%_lib \
+ --datadir=%{_libdir}/mpi/gcc/$mpi/share \
+ --includedir=%{_libdir}/mpi/gcc/$mpi/include \
+ --disable-dependency-tracking \
+%if 0%{?suse_version} > 1140
+ --enable-fortran \
+%endif
+ --enable-hl \
+ --enable-shared \
+ --enable-parallel \
+ --with-pthread
+
+make %{?_smp_mflags}
+cd ..
+done
+
%install
%makeinstall docdir=%{buildroot}%{_docdir}
rm -rf %{buildroot}/%{_libdir}/*.la
@@ -169,6 +350,15 @@
%_hdf5_version %{version}
EOF
+# install parallel version
+for mpi in %_mpi;
+do
+cd $mpi
+%makeinstall docdir=%{buildroot}%{_docdir}
+rm -rf %{buildroot}/%{_libdir}/mpi/gcc/$mpi/%_lib/*.la
+cd ..
+done
+
%check
make check
@@ -180,6 +370,24 @@
%postun -n %{libname}_hl%{hdf5_libver} -p /sbin/ldconfig
+%post -n %{libname}-%{hdf5_libver}-openmpi -p /sbin/ldconfig
+
+%postun -n %{libname}-%{hdf5_libver}-openmpi -p /sbin/ldconfig
+
+%post -n %{libname}_hl%{hdf5_libver}-openmpi -p /sbin/ldconfig
+
+%postun -n %{libname}_hl%{hdf5_libver}-openmpi -p /sbin/ldconfig
+
+%if 0%{?sles_version}
+%post -n %{libname}-%{hdf5_libver}-mvapich2 -p /sbin/ldconfig
+
+%postun -n %{libname}-%{hdf5_libver}-mvapich2 -p /sbin/ldconfig
+
+%post -n %{libname}_hl%{hdf5_libver}-mvapich2 -p /sbin/ldconfig
+
+%postun -n %{libname}_hl%{hdf5_libver}-mvapich2 -p /sbin/ldconfig
+%endif
+
%files
%defattr(-,root,root)
%doc COPYING MANIFEST README.txt release_docs/RELEASE.txt
@@ -241,4 +449,116 @@
%defattr(-,root,root)
%{_datadir}/hdf5_examples
+%files -n %{name}-openmpi
+%defattr(-,root,root)
+%doc COPYING MANIFEST README.txt release_docs/RELEASE.txt
+%doc release_docs/HISTORY-1_0-1_8_0_rc3.txt release_docs/HISTORY-1_8.txt
+%doc release_docs/RELEASE.txt
+%{_libdir}/mpi/gcc/openmpi/bin/gif2h5
+%{_libdir}/mpi/gcc/openmpi/bin/h52gif
+%{_libdir}/mpi/gcc/openmpi/bin/h5copy
+%{_libdir}/mpi/gcc/openmpi/bin/h5debug
+%{_libdir}/mpi/gcc/openmpi/bin/h5diff
+%{_libdir}/mpi/gcc/openmpi/bin/h5dump
+%{_libdir}/mpi/gcc/openmpi/bin/h5import
+%{_libdir}/mpi/gcc/openmpi/bin/h5jam
+%{_libdir}/mpi/gcc/openmpi/bin/h5ls
+%{_libdir}/mpi/gcc/openmpi/bin/h5mkgrp
+%{_libdir}/mpi/gcc/openmpi/bin/h5perf
+%{_libdir}/mpi/gcc/openmpi/bin/h5perf_serial
+%{_libdir}/mpi/gcc/openmpi/bin/h5redeploy
+%{_libdir}/mpi/gcc/openmpi/bin/h5repack
+%{_libdir}/mpi/gcc/openmpi/bin/h5repart
+%{_libdir}/mpi/gcc/openmpi/bin/h5stat
+%{_libdir}/mpi/gcc/openmpi/bin/h5unjam
+%{_libdir}/mpi/gcc/openmpi/bin/ph5diff
+
+%files -n %{libname}-%{hdf5_libver}-openmpi
+%defattr(0755,root,root)
+%{_libdir}/mpi/gcc/openmpi/%_lib/libhdf5.so.*
+%if 0%{?suse_version} > 1140
+%{_libdir}/mpi/gcc/openmpi/%_lib/libhdf5_fortran.so.*
+%endif
+
+%files -n libhdf5_hl%{hdf5_libver}-openmpi
+%defattr(0755,root,root)
+%{_libdir}/mpi/gcc/openmpi/%_lib/libhdf5_hl.so.*
+%if 0%{?suse_version} > 1140
+%{_libdir}/mpi/gcc/openmpi/%_lib/libhdf5hl_fortran.so.*
+%endif
+
+%files openmpi-devel
+%defattr(-,root,root)
+%{_libdir}/mpi/gcc/openmpi/bin/h5pcc
+%if 0%{?suse_version} > 1140
+%{_libdir}/mpi/gcc/openmpi/bin/h5pfc
+%endif
+%{_libdir}/mpi/gcc/openmpi/include/*.h
+%{_libdir}/mpi/gcc/openmpi/%_lib/*.so
+%{_libdir}/mpi/gcc/openmpi/%_lib/*.settings
+%if 0%{?suse_version} > 1140
+%{_libdir}/mpi/gcc/openmpi/include/*.mod
+%endif
+
+%files openmpi-devel-static
+%defattr(-,root,root)
+%{_libdir}/mpi/gcc/openmpi/%_lib/*.a
+
+%if 0%{?sles_version}
+%files -n %{name}-mvapich2
+%defattr(-,root,root)
+%doc COPYING MANIFEST README.txt release_docs/RELEASE.txt
+%doc release_docs/HISTORY-1_0-1_8_0_rc3.txt release_docs/HISTORY-1_8.txt
+%doc release_docs/RELEASE.txt
+%{_libdir}/mpi/gcc/mvapich2/bin/gif2h5
+%{_libdir}/mpi/gcc/mvapich2/bin/h52gif
+%{_libdir}/mpi/gcc/mvapich2/bin/h5copy
+%{_libdir}/mpi/gcc/mvapich2/bin/h5debug
+%{_libdir}/mpi/gcc/mvapich2/bin/h5diff
+%{_libdir}/mpi/gcc/mvapich2/bin/h5dump
+%{_libdir}/mpi/gcc/mvapich2/bin/h5import
+%{_libdir}/mpi/gcc/mvapich2/bin/h5jam
+%{_libdir}/mpi/gcc/mvapich2/bin/h5ls
+%{_libdir}/mpi/gcc/mvapich2/bin/h5mkgrp
+%{_libdir}/mpi/gcc/mvapich2/bin/h5perf
+%{_libdir}/mpi/gcc/mvapich2/bin/h5perf_serial
+%{_libdir}/mpi/gcc/mvapich2/bin/h5redeploy
+%{_libdir}/mpi/gcc/mvapich2/bin/h5repack
+%{_libdir}/mpi/gcc/mvapich2/bin/h5repart
+%{_libdir}/mpi/gcc/mvapich2/bin/h5stat
+%{_libdir}/mpi/gcc/mvapich2/bin/h5unjam
+%{_libdir}/mpi/gcc/mvapich2/bin/ph5diff
+
+%files -n %{libname}-%{hdf5_libver}-mvapich2
+%defattr(0755,root,root)
+%{_libdir}/mpi/gcc/mvapich2/%_lib/libhdf5.so.*
+%if 0%{?suse_version} > 1140
+%{_libdir}/mpi/gcc/mvapich2/%_lib/libhdf5_fortran.so.*
+%endif
+
+%files -n libhdf5_hl%{hdf5_libver}-mvapich2
+%defattr(0755,root,root)
+%{_libdir}/mpi/gcc/mvapich2/%_lib/libhdf5_hl.so.*
+%if 0%{?suse_version} > 1140
+%{_libdir}/mpi/gcc/mvapich2/%_lib/libhdf5hl_fortran.so.*
+%endif
+
+%files mvapich2-devel
+%defattr(-,root,root)
+%{_libdir}/mpi/gcc/mvapich2/bin/h5pcc
+%if 0%{?suse_version} > 1140
+%{_libdir}/mpi/gcc/mvapich2/bin/h5pfc
+%endif
+%{_libdir}/mpi/gcc/mvapich2/include/*.h
+%{_libdir}/mpi/gcc/mvapich2/%_lib/*.so
+%{_libdir}/mpi/gcc/mvapich2/%_lib/*.settings
+%if 0%{?suse_version} > 1140
+%{_libdir}/mpi/gcc/mvapich2/include/*.mod
+%endif
+
+%files mvapich2-devel-static
+%defattr(-,root,root)
+%{_libdir}/mpi/gcc/mvapich2/%_lib/*.a
+%endif
+
%changelog
++++++ baselibs.conf ++++++
libhdf5-0
hdf5-devel
requires -<targettype>
requires "libhdf5-0-<targettype> = <version>"
requires "libhdf5_hl0-<targettype> = <version>"
libhdf5-0-openmpi
libhdf5_hl-0-openmpi
hdf5-openmpi-devel
requires -openmpi-<targettype>
requires "libhdf5-0-openmpi-<targettype> = <version>"
requires "libhdf5_hl0-openmpi-<targettype> = <version>"
libhdf5-0-mvapich2
libhdf5_hl-0-mvapich2
hdf5-mvapich2-devel
requires -openmpi-<targettype>
requires "libhdf5-0-mvapich2-<targettype> = <version>"
requires "libhdf5_hl0-mvapich2-<targettype> = <version>"
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