This is probably suboptimal, but it may be good enough:

When configuring the weld bootstrap at 

https://github.com/ops4j/org.ops4j.pax.cdi/blob/master/pax-cdi-weld/src/main/java/org/ops4j/pax/cdi/weld/impl/WeldCdiContainer.java#L120

it is possible to disable concurrent deployment by  chaining
.add(ConfigurationKey.CONCURRENT_DEPLOYMENT,"false")

That should either solve the deadlock, or move it :) 

Simon

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