Hi Charles,
I can certainly sympathize with your chlorine battle. We have gone through the same thing here, only on a larger scale (sorry to use that word). We are presently using in our greenhouse, in addition to particulate & charcoal filters on the r.o. line, charcoal filters on the city water lines which supply the water to our  faucets and under-bench misters , as significant  problems continued even with the r.o. water for plant watering.
 
So far, it seems that if you get really high-powered charcoal/particulate filters, the plant symptoms disappear, but the standard charcoal filters seem to lose efficiency rapidly with heavy use for humidifying and the symptoms come back. I would suggest you try some of the  in-line activated charcoal cartridges, some of which can be gotten fairly cheaply, and see if they do the job before escalating to more expensive remedies. The r.o. guys said the cartridges can be gotten in places like Home Depot, but I've been unsuccessful in locating a similar source so far. Ours fit in our old Cuno canisters that were on the water lines since the 60s.
 
I assume you've been using a fertilizer tailored to r.o. water? A shift to pure water means adjustments to feeding also, and your plants will react adversely if you don't shift to the right ferts.
 
I would be curious to know what symptoms you have had, and on what genera, if you would e-mail me off-group.
 
Ann
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