One of the points I think has been missed in the discussions of the latest 
artilce with the earlier splitting then re-lumping of Cattleya Alliance 
species in the recent series of articles is this. 

The first passes through on orchid molecular taxonomy were done on 
analysis done with a SINGLE DATA SET. This could be interpreted as the 
coding for a single enzyme or protien, a single DNA sequence. This is not 
the whole genome. The big problem was in Cattleya maxina, to make it fit, 
you had to do weird things with Laelia to make Cattleya maxima fit in the 
genus Cattleya. Next generation of these studies were done with 2 data 
sets, meaning the coding for two separate enzymes or protiens. The DNA 
coding these enzymes or protiens are probably on different chromosomes. 
This requires double the lab cost and the square of the computer power. So 
initially this work was done as a single data set for all and the second 
data set test done on select problem species. As the cost, time and ease 
of the techniques made things more affordable, more testing was done. 

Now this latest article is unique in that THREE data sets were employed. 
Three enzymes, three different DNA sequences, three times the lab effort 
and cube the computing power required.  So the result is more 
scientifically robust, and in some ways it moves us back to more sensible 
lumping of species. 

As  a separate thought. In most plant groups, species that interbreed 
easily are usually put in the same genus. In most plant groups 
intergeneric crosses are difficult. In orchids, especially the Cattleya 
alliance, interbreeding between genera seems easy. This may be an 
indication that too much taxonomic splitting has been done. The 3 data set 
that says the main Cattleya Alliance genera all should be moved back into 
Cattleya makes some sense supported by the fact that intergeneric hybrid 
are so easy and quite fertile between these groups. Potinara and other 
quadrageneric hybrids really should not be so easy to make if the genera 
were truely evolutionarily separate. It's all Cattleya makes some sense, 
understanding that 'all' is not absolute. I suspect things like Leptotes 
or some of the other minors are different enough that they will stand 
after the more thorough DNA treatment. 

So I think the point is - taxonomic revisions based on molecular 
cladistics should  NEVER have been made until the technique was refined 
more and made more robust. Until the costs come down, and the DNA data set 
libraries are built up enough, I am not changing any labels on my plants 
simply because of a single study of a single data set. Molecular 
cladistics is an immature science, particuarly in orchids, the libraries 
of DNA sequences are too limited. Not enough of the orchid genomes are 
cataloged to make molecular cladistics as strong as the old fasioned 
phenotype trait based taxonomy. Someday in the future things will be 
different. Using DNA is not as simple as the Maury Povich Show makes it 
seem to be. You are NOT the father! 

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