Geoffroy,
Here is my progress so far to have openmpi-oscar-1.4.2 built.
All my work is related to ~svn/pkgsrc/opkg/openmpi/trunk
in that directory, I've:
1)added the following files:
- build.cfg => I 'don't know if it's ok as I'm not familiar with syntax. lines
seems to be duplicated, please check if it is ok.
although note that it still includes dependancy on:
- libibverbs-devel (openfabrics wich provides openib stack: standard in
CentOS5 starting with update 4 at least)
- blcr-devel (Berkley checkpoint-restart stack):
https://ftg.lbl.gov/CheckpointRestart/CheckpointDownloads.shtml
rpmbuild --rebuild
https://ftg.lbl.gov/CheckpointRestart/downloads/blcr-0.8.2-1.src.rpm will
provides all necessary components.
- openmpi-oscar.cfg
- openmpi-switcher-modulefile.cfg (maybe it should be named
openmpi-oscar-switcher-modulefile.cfg)
- rpm/openmpi-1.4.2.spec (which is the original spec file with $VERSION and
$EXTENSION replaced with correct values (maybe bad idea))
2) updated the Makefile (patch attached)
3) updated /opt/openmpi-switcher-modulefile-1.4.2/share/openmpi/openmpi-1.4.2
(attached) which I'm unable to find in the cvs tree (only source rpm is
available)
this update fix the check for libcr.so and libgm.so that are searched into
/usr/lib even on 64bits systems wich naturaly fails.
I did not touch ~svn/oscar/packages/openmpi/config.xml as I'm building packages
by doing the following:
cd ~svn/pkgsrc/opkg/openmpi/trunk
make rpm
In fact, I must admint that I'm a little bit lost in build system as I'm using
2 svn repositories:
http://svn.oscar.openclustergroup.org/oscar/trunk/ (in ~svn/oscar/)
http://svn.oscar.openclustergroup.org/oscar/pkgsrc/ (in ~svn/pkgsrc)
For example, I've created ~svn/pkgsrc/opkg/openmpi/trunk/build.cfg from
http://svn.oscar.openclustergroup.org/oscar/pkgsrc/opkg/lam/trunk/build.cfg
before noticing that
http://svn.oscar.openclustergroup.org/oscar/trunk/packages/openmpi/SRPMS/build.cfg
existed.
Sometimes, files like build.cfg are located in:
http://svn.oscar.openclustergroup.org/oscar/pkgsrc/opkg/<product>/trunk/build.cfg
and sometimes it's located in:
http://svn.oscar.openclustergroup.org/oscar/trunk/packages/<product>/SRPMS/build.cfg
Finaly, some packages seems to exists, but there is no rpm in the repo:
eg: http://svn.oscar.openclustergroup.org/oscar/trunk/packages/blcr/config.xml
I've done an rpmbuild --rebuild
https://ftg.lbl.gov/CheckpointRestart/downloads/blcr-0.8.2-1.src.rpm in the
meantime.
Sorry for long mail, I understand that this work is baldy presented, but it's
the best I can do regarding my understanding of the build system.
As usual, please review carfully those modifications as they may be
inapropriate regarding oscar rules (naming scheem, ...)
Best regards,
Olivier.
--
Olivier LAHAYE
CEAEA Saclay
DRT-LIST-DCSI-DIR
[fc:5|6|7|8:*]
requires: switcher:modules-oscar
common: openmpi-oscar --target noarch --define "config_options FC=gfortran
--with-tm=/opt/pbs"
common: openmpi-switcher-module
requires: torque:torque
openmpi-oscar --define "config_options FC=gfortran --with-tm=/opt/pbs"
[sles|suse:*:*]
requires: gcc-fortran
requires: switcher:modules-oscar
common: openmpi-oscar --target noarch --define "config_options FC=gfortran
--with-tm=/opt/pbs"
common: openmpi-switcher-modulefile
requires: torque:torque
openmpi-oscar --define "config_options FC=gfortran --with-tm=/opt/pbs"
[rhel:4|5:*]
requires: gcc-gfortran blcr-devel libibverbs-devel
requires: switcher:modules-oscar
common: openmpi-oscar --target noarch --define "configure_options FC=gfortran
--with-tm=/opt/pbs --with-blcr=yes --with-ft=cr --with-openib" --define
"install_in_opt 1" --define "ofed 1" --define "_name openmpi-oscar" --define
"install_shell_scripts 1" --define "install_modulefile 1" --define
"use_mpi_selector 1" --define "allow_fortify_source 0" --define
"modules_rpm_name modules-oscar"
common: openmpi-switcher-modulefile
requires: torque:torque
openmpi-oscar --define "config_options FC=gfortran --with-tm=/opt/pbs
--with-blcr=yes --with-ft=cr --with-openib" --define "install_in_opt 1"
--define "ofed 1" --define "_name openmpi-oscar" --define
"install_shell_scripts 1" --define "install_modulefile 1" --define
"use_mpi_selector 1" --define "allow_fortify_source 0" --define
"modules_rpm_name modules-oscar"
# --with-sge (Sun Grid engine support)
# sample config file, might need change for certain distros
[*:*:*]
requires: switcher:modules-oscar
common: openmpi-oscar --target noarch --define "--with-tm=/opt/pbs"
common: openmpi-switcher-module
requires: torque:torque
openmpi-oscar --define "config_options --with-tm=/opt/pbs"
Index: Makefile
===================================================================
--- Makefile (révision 9212)
+++ Makefile (copie de travail)
@@ -4,6 +4,6 @@
@echo "Debian package(s) not yet available"
rpm: clean
- /usr/bin/build_package --type rpm --output $(PKGDEST) --url http://www.csm.ornl.gov/srt/downloads/oscar/openmpi-1.2.4.tar.bz2 --package-name openmpi --verbose
+ /usr/bin/build_package --type rpm --output $(PKGDEST) --url http://www.csm.ornl.gov/srt/downloads/oscar/openmpi-1.4.2.tar.bz2 --package-name openmpi-oscar --verbose
clean:
source = wget,
http://www.open-mpi.org/software/ompi/v1.4/downloads/openmpi-1.4.2-1.src.rpm
source = wget,
http://www.csm.ornl.gov/srt/downloads/oscar/openmpi-switcher-modulefile-1.4.2-1.src.rpm
#%Module -*- tcl -*-
#
# Copyright (c) 2006 The Trustees of Indiana University and Indiana
# University Research and Technology
# Corporation. All rights reserved.
# Copyright (c) 2006 Cisco Systems, Inc. All rights reserved.
# $COPYRIGHT$
#
# Additional copyrights may follow
#
# $HEADER$
# This modulefile is a dispatcher for other Open MPI modulefiles. It
# looks around the environment of the machine and determines which
# Open MPI modulefile to load (i.e., which Open MPI installation to
# use).
proc ModulesHelp { } {
puts stderr "\tThis module acts as a dispatcher to automatically"
puts stderr "\tload the 'right' Open MPI installation into your"
puts stderr "\tenvironment based on what Open MPI installations are"
puts stderr "\tavailable and the environment available on this machine."
}
proc GetLibDir { } {
set unameexe "/bin/uname"
if { [file exists $unameexe] } {
set machinetype [ exec /bin/uname -m ]
if { $machinetype == "x86" ||
$machinetype == "i386" ||
$machinetype == "i486" ||
$machinetype == "i586" ||
$machinetype == "i686" } {
return /usr/lib
}
if { $machinetype == "x86_64" ||
$machinetype == "ia64" } {
return /usr/lib64
}
}
}
module-whatis "Automatically select an appropriate Open MPI modulefile to load."
# Don't let any other MPI module be loaded while this one is loaded
conflict mpi
# Directory where we'll find the Open MPI modulefiles.
set modulefiledir /opt/modules/modulefiles
# See if we have BLCR and/or GM
set have_blcr [file exists [GetLibDir]/libcr.so]
set have_gm [file exists [GetLibDir]/libgm.so]
# Get the version number of the Open MPI represented by this modulefile
set version [lindex [split [module-info name] "-"] 1]
# If we find a matching modulefile, [un]load it. Otherwise, fail
# silently because we don't want to interject stuff in stderr for fear
# of breaking system-level scripts (e.g., cexec). The "break"
# statement in the final else clause will ensure that this module is
# actually not loaded. So fail silently, but under protest. ;-)
set dir "$modulefiledir/openmpi"
if { $have_blcr == 1 && $have_gm == 1 &&
[file exists $dir/openmpi-with-blcr-and-gm-$version] } {
module load $dir/openmpi-with-blcr-and-gm-$version
} elseif { $have_blcr == 0 && $have_gm == 1 &&
[file exists $dir/openmpi-with-gm-$version] } {
module load $dir/openmpi-with-gm-$version
} elseif { $have_blcr == 1 && $have_gm == 0 &&
[file exists $dir/openmpi-with-blcr-$version] } {
module load $dir/openmpi-with-blcr-$version
} elseif { [file exists $dir/openmpi-$version] } {
module load $dir/openmpi-$version
} else {
break
}
------------------------------------------------------------------------------
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