When I try to run mpirun within a PBS script I get the following message in my error file:
It seems that there is no lamd running on this host, which indicates that the LAM/MPI runtime enviornment is not operating. The LAM/MPI runtime enviornment is necessary for MPI programs to run (the MPI program tried to invoke the "MPI_Init" function). Please run the "lamboot" command the start the LAM/MPI runtime environment. See the LAM/MPI documentation for how to invoke "lamboot" across multiple machines. When I go to the command line and execute the same command that is in my PBS script mpirun executes normally and my program produces the expected output. So I am assuming the LAM/MPI is running fine when the script is exectuing. Are there an commands that I am missing in the script? Thanks for the help. -Chris ------------------------------SCRIPT----------------------------------- #PBS -o /home/cluster/output.txt #PBS -e /home/cluster/error.txt # # cd ~/cluster/biomap # mpirun -np 3 biomap # # ------------------------------------------------------- This SF.net email is sponsored by: ValueWeb: Dedicated Hosting for just $79/mo with 500 GB of bandwidth! No other company gives more support or power for your dedicated server http://click.atdmt.com/AFF/go/sdnxxaff00300020aff/direct/01/ _______________________________________________ Oscar-users mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/oscar-users
