http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/oscar/oscar/packages/pbs/SRPMS/
However, I'm not sure what advantage you'll gain by using the PBS TM interface. mpirun itself should be capable of what you're after (stdin to all nodes, stdout back to one node). You might want to give it a try if you haven't already.
Jeremy
At 06:14 PM 6/19/2003 -0500, Chris Oubre wrote:
Hello, I would like to use the PBS queue system to run mpi jobs. From what I understand, mpiexec will do this. I've compiled and installed mpiexec-0.74. When I run jobs, I get horribly garbled output. The README that comes with the mpiexec tar ball says
... [SNIP] 1. For sufficiently new PBS distributions (OpenPBS-2.3.11 through .16 are known to work), applying this patch adds the functionality which allows the stdio streams to be sent back to mpiexec on the fly rather than to each pbs_mom's job output area. It also makes stdin distribution work if you choose to send stdin to more than just the main node. You may choose not to apply the patch, in which case these things won't work, but the basic MPI spawning through the TM interface of PBS will still work.
Patch your PBS distribution with pbs-2.3.12-mpiexec.diff and recompile. (The patch works on all versions .12 through .16).
cd /usr/local/src/pbs-2.3.12 patch -p1 -sNE < /home/pw/src/mpiexec/patch/pbs-2.3.12-mpiexec.diff
Attempts have been made so that the behavior of PBS does not change unless explicitly instructed to do so by mpiexec. You'll need to build and install PBS as usual, then restart all the MOMs on the compute nodes. [SNIP] ...
Does anyone know if this patch works with the OSCARized version of PBS?
And where do I get the source for the OSCARized version of PBS?
I'm running OSCAR 2.1 on Red Hat 7.2
**************************************************** Christopher D. Oubre * email: [EMAIL PROTECTED] * research: http://cmt.rice.edu/~coubre * Web: http://www.angelfire.com/la2/oubre * Hangout: http://pub44.ezboard.com/bsouthterrebonne * Phone:(713)348-3541 Fax: (713)348-4150 * Rice University * Department of Physics, M.S. 61 * 6100 Main St. ^-^ * Houston, Tx 77251-1892, USA (O O) * -= Phlax=- ( v ) * ************************************m*m*************
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