Thanks Chuck, Unfortunately, I get the same error. Here's the output of oscar-config --bootstrap:
Verbosity: 0 ============================================================================= == OSCAR bootstrap ============================================================================= INFO: the /tftpboot/oscar/rhel-5-x86_64.url already exists, we do nothing at /usr/lib/perl5/vendor_perl/5.8.8/OSCAR/PackagePath.pm line 1060. INFO: the /tftpboot/distro/centos-5-x86_64.url file already exists, we do nothing at /usr/lib/perl5/vendor_perl/5.8.8/OSCAR/PackagePath.pm line 1102. Updating OSCAR on your system... Success: 01_update_ubuntu_repo ============================================================================= == Setting centos-5-x86_64... ============================================================================= Success: 02_update_repo_conffile Loaded plugins: fastestmirror Repository oscar is listed more than once in the configuration Cleaning up Everything Cleaning up list of fastest mirrors Distro repository /tftpboot/oscar/rhel-5-x86_64 not found. Creating empty directory. at /usr/lib/perl5/vendor_perl/5.8.8/OSCAR/PackagePath.pm line 371. mkdir /tftpboot/oscar/rhel-5-x86_64 Pools to prepare for distro centos-5-x86_64: [ http://bison.csm.ornl.gov/repos/unstable/rhel-5-x86_64 http://mirror.centos.org/centos/5.4/os/x86_64/ http://mirror.centos.org/centos/5.4/extras/x86_64/ ] Array: 3 element(s) Preparing pools: http://bison.csm.ornl.gov/repos/unstable/rhel-5-x86_64 http://mirror.centos.org/centos/5.4/os/x86_64/ http://mirror.centos.org/centos/5.4/extras/x86_64/ Pool: http://bison.csm.ornl.gov/repos/unstable/rhel-5-x86_64 ============================================================================= == Preparing pool: http://bison.csm.ornl.gov/repos/unstable/rhel-5-x86_64 ============================================================================= Pool: http://mirror.centos.org/centos/5.4/os/x86_64/ ============================================================================= == Preparing pool: http://mirror.centos.org/centos/5.4/os/x86_64/ ============================================================================= Pool: http://mirror.centos.org/centos/5.4/extras/x86_64/ ============================================================================= == Preparing pool: http://mirror.centos.org/centos/5.4/extras/x86_64/ ============================================================================= Initializing ODA: mysql [ http://bison.csm.ornl.gov/repos/unstable/rhel-5-x86_64 http://mirror.centos.org/centos/5.4/os/x86_64/ http://mirror.centos.org/centos/5.4/extras/x86_64/ ] Array: 3 element(s) Transaction Check Error: package mysql-5.0.77-4.el5_4.2.x86_64 (which is newer than mysql-5.0.77-3.el5.i386) is already installed file /etc/my.cnf from install of mysql-5.0.77-3.el5.i386 conflicts with file from package mysql-5.0.77-4.el5_4.2.x86_64 Error Summary ------------- ERROR during execution 256 Use of uninitialized value in join or string at /usr/lib/perl5/vendor_perl/5.8.8/OSCAR/PackMan.pm line 656. ERROR: -1 error(s) occured for prereq perl-DBD-MySQL, mysql-server( Available Packages Name : perl-DBD-MySQL Arch : x86_64 Version : 3.0007 Release : 2.el5 Size : 148 k Repo : os_x86_64 Summary : A MySQL interface for perl URL : http://search.cpan.org/dist/DBD-mysql/ License : GPL or Artistic Description: An implementation of DBI for MySQL for Perl. Available Packages Name : mysql-server Arch : x86_64 Version : 5.0.77 Release : 3.el5 Size : 9.8 M Repo : os_x86_64 Summary : The MySQL server and related files URL : http://www.mysql.com License : GPLv2 with exceptions Description: MySQL is a multi-user, multi-threaded SQL database server. MySQL is : a client/server implementation consisting of a server daemon : (mysqld) and many different client programs and libraries. This : package contains the MySQL server and some accompanying files and : directories. Setting up Install Process Resolving Dependencies --> Running transaction check ---> Package mysql-server.x86_64 0:5.0.77-3.el5 set to be updated --> Processing Dependency: mysql = 5.0.77-3.el5 for package: mysql-server ---> Package perl-DBD-MySQL.x86_64 0:3.0007-2.el5 set to be updated --> Running transaction check ---> Package mysql.i386 0:5.0.77-3.el5 set to be updated --> Finished Dependency Resolution Dependencies Resolved ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: mysql-server x86_64 5.0.77-3.el5 os_x86_64 9.8 M perl-DBD-MySQL x86_64 3.0007-2.el5 os_x86_64 148 k Installing for dependencies: mysql i386 5.0.77-3.el5 os_x86_64 4.8 M Transaction Summary ================================================================================ Install 3 Package(s) Update 0 Package(s) Remove 0 Package(s) Total size: 15 M Downloading Packages: Running rpm_check_debug Running Transaction Test Finished Transaction Test ) at /usr/bin/install_prereq line 81 main::handle_smart_pkgs(0, 'perl-DBD-MySQL', 'mysql-server') called at /usr/bin/install_prereq line 407 main::install_prereq('centos', 5, 'x86_64', 'ARRAY(0x45e71c0)', 'rpm') called at /usr/bin/install_prereq line 473 ERROR: The following packages were NOT installed: perl-DBD-MySQL, mysql-server at /usr/bin/install_prereq line 415 main::install_prereq('centos', 5, 'x86_64', 'ARRAY(0x45e71c0)', 'rpm') called at /usr/bin/install_prereq line 473 ERROR: Impossible to install the prereqs at /usr/bin/install_prereq line 474. ERROR: impossible to install oda (/usr/bin/install_prereq --smart /usr/share/oscar/prereqs/oda). at /usr/lib/perl5/vendor_perl/5.8.8/OSCAR/ODA/Bootstrap.pm line 227 Can't locate DBD/mysql.pm in @INC (@INC contains: /lib /lib/OSCAR /usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/site_perl/5.8.8 /usr/lib/perl5/site_perl /usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/vendor_perl/5.8.8 /usr/lib/perl5/vendor_perl /usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/5.8.8 .) at /usr/lib/perl5/vendor_perl/5.8.8/OSCAR/oda.pm line 33. BEGIN failed--compilation aborted at /usr/lib/perl5/vendor_perl/5.8.8/OSCAR/oda.pm line 33. Compilation failed in require at /usr/lib/perl5/vendor_perl/5.8.8/OSCAR/ODA/Bootstrap.pm line 58. ERROR: Impossible to execute /usr/bin/oda --init mysql at /usr/bin/oscar-config line 99 ERROR: Impossible to install the server side of OSCAR at /usr/bin/oscar-config line 99 ERROR: Impossible to complete stage 2 of the bootstrap. at /usr/bin/oscar-config line 99 ERROR: Impossible to bootstrap OSCAR at /usr/bin/oscar-config line 100 main::bootstrap() called at /usr/bin/oscar-config line 331 ERROR: Impossible to bootstrap OSCAR at /usr/bin/oscar-config line 332. [r...@psy02348 ~]# -----Original Message----- From: Chuck Ritter [mailto:cfr...@psu.edu] Sent: Fri 07/05/2010 05:55 To: oscar-users@lists.sourceforge.net Subject: Re: [Oscar-users] Advice requested on bootstrap failure Neil, I've found these instructions work to install the basic packages (w/o ganglia/torque/maui): http://svn.oscar.openclustergroup.org/trac/oscar/wiki/repoTesting Notice the few subtle differences. Patches have also been posted -- by another developer -- on the oscar-devel list. These fix some problems with 6.0.5. To my knowledge these patches have not been incorporated in the svn repository yet. Hope that helps. Chuck
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