I ran strace in count mode for 10 seconds on both servers:

Server #1
strace -c -p 9773
Process 9773 attached - interrupt to quit
Process 9773 detached
% time     seconds  usecs/call     calls    errors syscall
------ ----------- ----------- --------- --------- ----------------
 99.68    0.028147           0    165935           read
  0.17    0.000048           0       157           recvfrom
  0.08    0.000022           0       126           _llseek
  0.07    0.000019           0       157           time
  0.00    0.000000           0       114           write
------ ----------- ----------- --------- --------- ----------------
100.00    0.028236                166489           total

Server #2
strace -c -p 855
Process 855 attached - interrupt to quit
Process 855 detached
% time     seconds  usecs/call     calls    errors syscall
------ ----------- ----------- --------- --------- ----------------
100.00    0.017206           0    292706           read
  0.00    0.000000           0         3           lseek
  0.00    0.000000           0        46           recvfrom
  0.00    0.000000           0        46           time
------ ----------- ----------- --------- --------- ----------------
100.00    0.017206                292801           total

What else would you like to see?

Thanks,
-- 
Doug Burks, GSE, CISSP
President, Greater Augusta ISSA
http://augusta.issa.org
http://securityonion.blogspot.com

On Thu, May 19, 2011 at 10:06 AM, Doug Burks <[email protected]> wrote:
> I've verified this issue on two CentOS 5.6 servers now:
> 1.  OSSEC Server installation with ~40 agents.  Attaching strace to
> the ossec-analysisd process shows that it's receiving syscheck info
> (filenames and hashes) from some of the OSSEC agents.
> 2.  OSSEC local installation.  Attaching strace to the ossec-analysisd
> process shows that it's receiving syscheck info (filenames and hashes)
> from some of the local files.  (Of course, this doesn't cause the
> agents to disconnect since it is a local installation and there are no
> agents.)
>
> Thanks,
> --
> Doug Burks, GSE, CISSP
> President, Greater Augusta ISSA
> http://augusta.issa.org
> http://securityonion.blogspot.com
>
>
> On Thu, May 19, 2011 at 9:23 AM, Daniel Cid <[email protected]> wrote:
>> Awesome! :) Can you run strace in there so we can get an idea on what
>> it is doing? It is probably
>> in a lock/loop somewhere....
>>
>> thanks,
>>
>> On Thu, May 19, 2011 at 9:36 AM, Doug Burks <[email protected]> wrote:
>>> My CentOS 5.6 server is now displaying this behavior again.  ossec-analysisd
>>> is at 99% CPU usage and causing agents to disconnect.  It's been a few weeks
>>> since performing the upgrade to CentOS 5.6 and I haven't seen the issue
>>> until today.  Any ideas on how to troubleshoot ossec-analysisd?
>>> Thanks,
>>> Doug
>>
>
>
>
> --
> Doug Burks, GSE, CISSP
> President, Greater Augusta ISSA
> http://augusta.issa.org
> http://securityonion.blogspot.com
>

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